Pairwise Alignments

Query, 815 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 804 a.a., FIG00809136: hypothetical protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  432 bits (1111), Expect = e-125
 Identities = 267/789 (33%), Positives = 432/789 (54%), Gaps = 23/789 (2%)

Query: 13  LLRWSLSEIRHGQLWPVTVALTLIIASIFALTALAQRMEQVIVKQGRDALTADTVFVSGN 72
           + RW   E R   L  V +AL+L +A + AL +++ RME+ + +Q R+ +  D    S  
Sbjct: 2   IARWFWREWRSPSLIIVWLALSLAVACVLALGSISDRMEKGLSQQSREFMAGDRTLQSSR 61

Query: 73  PLPESLLTLTAQQASQTSQMTRFATMAFSDQGMQLVTVKAVDSAYPLRGEMRLSDGQQTF 132
            +P++ L    ++     +   FATM F+    QL +VKAVDS YP+ GE++   G    
Sbjct: 62  EVPKAWLEEARKRGLNVGEQLTFATMTFAGDTPQLASVKAVDSVYPMYGELQTRPGGVK- 120

Query: 133 NHVASNQLWLEPRVKDQLGVDIGDNVTIGDADFVVSGEVLEEPGLSFNPFQQMPSVYIHA 192
                  + L PR+   L +  GD + +GD    ++GEV++EP   FNPFQ  P + ++ 
Sbjct: 121 --AQPGSVLLAPRLMALLNLKTGDTIDVGDVTLRIAGEVVQEPDSGFNPFQMAPRLMMNM 178

Query: 193 SDVDKTGAIQPGSRVQFSLFMTGDDSAIESIKQQV--SLTASDRWR--DQESGSRTNEVF 248
           +DV KTGAIQPGSRV +     G    +   +  +   L    RW   +Q+ G+   +  
Sbjct: 179 ADVAKTGAIQPGSRVMWRYKFGGTPQQLAGYESWLLPQLKPEHRWYGLEQDDGA-LGKSL 237

Query: 249 ERTQQYLSLTVAIVILMAATTLVLTCQHYVSTRTHTIAMLKSLGASRRWLRRWLALQVGL 308
           ER+QQ+L L+  + +L+A   + +   HY  +R   +A+LK+LGA R  LR+ +  Q  +
Sbjct: 238 ERSQQFLLLSALLTLLLAVAAVAVAMSHYCRSRYDLVAILKTLGAGRAQLRKLIIGQWLM 297

Query: 309 LLVFAVVLGSVIGVGLESLLRLPLKDLLPDPLPSYGLRPLWIALASSFLIAVPALGIPLG 368
           +L  + V G  IG+  E++L + LK +LP  LP   L P   AL +  +I++     P  
Sbjct: 298 VLGLSAVTGGAIGLLFENILLVLLKPVLPADLPPASLWPWLWALGAMTVISLLVGLRPYR 357

Query: 369 RLLSVSAVAVMQPVTAQTRWQRNLLL-IMVPIVPLLLVYWQ--NQLIWIVLIGIVVLFAM 425
            LL+   + V++       W   + L +   +V  LLV     + L+W VL G V+L  +
Sbjct: 358 LLLATQPLRVLRRDVVARVWPLKIYLPVACAVVVALLVGLMGGSMLLWAVLAGAVILALL 417

Query: 426 LAVVSVLVTRLLAKLPLNPA-MALALSRINRSGAASGLQFGALALSLMLLAIIWLVRTDL 484
             +V  ++  +L  + L    + LA+SR+ R   ++  Q  A +LS MLLA++ ++R DL
Sbjct: 418 CGLVGWMLLNVLRGMTLTSLPLRLAVSRLLRQPWSTLSQLSAFSLSFMLLALLLVLRGDL 477

Query: 485 LSDWQRTLPENAPNAFALNISESEKASYLAALDTASIERSAAYPIMRGRLTHINGQEAKQ 544
           L  WQ+ LP  +PN F +NI+  + A   A L    +     YPI+R RLT ING   + 
Sbjct: 478 LDRWQQQLPPESPNYFLINIASEQVAPLKAFLAEHQVIPQTFYPIVRARLTKINGNPTEG 537

Query: 545 YAQNGEESSDALRRELNLTWAEQLPDYNPILQGEWQSQNG-VSVEQEVASDLGLKLGDTL 603
                 +  ++L RELNLTW +  P +NP++ G W  + G VS+E+ +A  L +KLGD++
Sbjct: 538 ------QQDESLNRELNLTWQDTRPAHNPLVAGHWPPKPGEVSMEEGLAKRLNVKLGDSV 591

Query: 604 TFMINSQTVSAQVNTIRQVEWREMKPNFYFIFSPDVVQNLPVSYLISFRIQPEHDALLGQ 663
           TFM ++Q  SA+V ++RQV+W  ++PNF+FIF    +   P S+L SFR +   + +L Q
Sbjct: 592 TFMGDTQAFSAKVTSLRQVDWESLRPNFFFIFPSGALDGQPQSWLTSFRWE-NGNGMLTQ 650

Query: 664 LSRQHPTVSLMDIRTMGAKIQALLTQIVWSVTVLAALGVLAGVLLIFTLLRLSLSQRQQE 723
           L+R+ PTVSL+DI  +  ++  +L Q+  ++ V+  L  L G+LL+   +++ + QR QE
Sbjct: 651 LNREFPTVSLLDIGAILKQVGQVLEQVSRALEVMVVLVTLCGMLLLLAQVQVGMRQRHQE 710

Query: 724 IRLYRTLGASRRRVMHTIWAEYGVMALVGGLVASVSADAVVAAVMKWGFSLTPSLHMALW 783
           + ++RTLGA ++ +  T+W E+ ++ LV GLVA++ A+  +A +    F         LW
Sbjct: 711 LVVWRTLGAGKKLLRTTLWCEFAMLGLVAGLVAAIGAETALAILQINVFDFPWEPDWRLW 770

Query: 784 FVLPALTFC 792
             LP   FC
Sbjct: 771 GALP---FC 776