Pairwise Alignments

Query, 815 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 810 a.a., ABC transporter permease from Dickeya dadantii 3937

 Score =  462 bits (1190), Expect = e-134
 Identities = 281/800 (35%), Positives = 440/800 (55%), Gaps = 12/800 (1%)

Query: 15  RWSLSEIRHGQLWPVTVALTLIIASIFALTALAQRMEQVIVKQGRDALTADTVFVSGNPL 74
           RW   E R   L  V +ALTL +A + AL A++ RME+ + +Q RD L  D V  +  P+
Sbjct: 4   RWFWREWRSPSLLIVWLALTLSVACVLALGAISDRMEKGLSQQSRDFLAGDRVLRASRPV 63

Query: 75  PESLLTLTAQQASQTSQMTRFATMAFSDQGMQLVTVKAVDSAYPLRGEMRLSDGQQTFNH 134
            E+ L    QQ    S+   F TM ++    QL  VKA D  YPL GE++    Q     
Sbjct: 64  DENWLQQAQQQGLTQSRQVSFMTMTYAGDNAQLAQVKATDERYPLYGELKT---QPAGLR 120

Query: 135 VASNQLWLEPRVKDQLGVDIGDNVTIGDADFVVSGEVLEEPGLSFNPFQQMPSVYIHASD 194
           VA   +   PR+   LG+  GD + +GD    ++GE+++EP   FNPF+  P V ++ +D
Sbjct: 121 VAPGTVLAAPRLLALLGLKAGDRLDVGDTSLTIAGELVQEPDAGFNPFETAPRVLMNLAD 180

Query: 195 VDKTGAIQPGSRVQFSLFMTGDDSAIESIKQQVS--LTASDRWRDQE-SGSRTNEVFERT 251
           V+KTGAIQPG R+ +     G  S I      +   L    RW   E S S   +  +R+
Sbjct: 181 VEKTGAIQPGGRITWRYMFAGTPSQIARFSDVIKPQLKPDQRWYGMEDSQSALGKSLQRS 240

Query: 252 QQYLSLTVAIVILMAATTLVLTCQHYVSTRTHTIAMLKSLGASRRWLRRWLALQVGLLLV 311
           QQ+L L+  + +L++   + +   HY  +R   +A+LK+LGA R+ LRR +  Q   +L 
Sbjct: 241 QQFLLLSALLTLLLSVAAVAVAMGHYCRSRYDLVAVLKTLGAGRQALRRLIVGQWVSVLA 300

Query: 312 FAVVLGSVIGVGLESLLRLPLKDLLPDPLPSYGLRPLWIALASSFLIAVPALGIPLGRLL 371
            + + GS++G+G E+LL   L  +LP  LP+ GL P   AL +  LI++     P  +LL
Sbjct: 301 LSALCGSLLGMGFEALLIRALSPVLPGELPAAGLWPWGWALGTLVLISLLVGMRPYRQLL 360

Query: 372 SVSAVAVMQPVTAQTRWQ-RNLLLIMVPIVPLLLVYWQN--QLIWIVLIGIVVLFAMLAV 428
           +   + V++       W  R  L ++V +V  LLV       L+W +L G++ L  +L  
Sbjct: 361 ATQPLRVLRQDVVANVWPLRYYLPVVVAVVIGLLVILSGGGALLWSLLGGMLALALLLGG 420

Query: 429 VSVLVTRLLAKLPLNP-AMALALSRINRSGAASGLQFGALALSLMLLAIIWLVRTDLLSD 487
           +      LL +L L   ++ LA++R+ R    +  Q  A +LS MLLA++ L+R DLL  
Sbjct: 421 IGWGSLLLLRRLTLKTLSLRLAINRLLRQPWVTLGQLAAFSLSFMLLALLLLLRGDLLDR 480

Query: 488 WQRTLPENAPNAFALNISESEKASYLAALDTASIERSAAYPIMRGRLTHINGQEAKQYAQ 547
           WQ+ LP  +PN F LNI+  +       L    ++    YPI+R RLT ING  A     
Sbjct: 481 WQQQLPPGSPNYFVLNINTDQVPQVTDFLAQHQVKPETFYPIIRARLTEINGLRATDLVH 540

Query: 548 NGEESSDALRRELNLTWAEQLPDYNPILQGEWQSQNG-VSVEQEVASDLGLKLGDTLTFM 606
             +   + + RELNLTW  QLPD+NP++ G+W  + G VS+EQ VA  LG+K+GD+LTF 
Sbjct: 541 EDDPGGETVNRELNLTWLTQLPDHNPLVAGQWPPKAGEVSIEQGVAQRLGVKIGDSLTFT 600

Query: 607 INSQTVSAQVNTIRQVEWREMKPNFYFIFSPDVVQNLPVSYLISFRIQPEHDALLGQLSR 666
            ++Q   A ++++RQV+W  ++PNF+FIF    + + P S+L SFR +   D L+ QL+R
Sbjct: 601 GDTQPFQATISSLRQVDWESLRPNFFFIFPSGSLDSQPQSWLTSFRYE-GGDTLITQLNR 659

Query: 667 QHPTVSLMDIRTMGAKIQALLTQIVWSVTVLAALGVLAGVLLIFTLLRLSLSQRQQEIRL 726
           Q PT++++D+  +  +I  +L Q+  ++ V+  L +  G LL+   +++ + QR+QE+ +
Sbjct: 660 QFPTLTVLDVGAILKQIGTVLQQVGLALEVMVVLVLFCGALLLLAQIQVGMRQRRQELIV 719

Query: 727 YRTLGASRRRVMHTIWAEYGVMALVGGLVASVSADAVVAAVMKWGFSLTPSLHMALWFVL 786
           YRTLGA RR +  T+W E+ V+ L  G+ A++ A+A +  + +  F      ++ LW  L
Sbjct: 720 YRTLGAGRRLLRATLWWEFAVLGLSAGVAAALGAEAALWLLQRKVFDFPWQPNLWLWGGL 779

Query: 787 PALTFCTLAAVVSSLLKRLL 806
           P +    L+     L  RLL
Sbjct: 780 PVVAALLLSLYGGWLGLRLL 799