Pairwise Alignments

Query, 815 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 826 a.a., hypothetical protein from Acinetobacter radioresistens SK82

 Score =  350 bits (897), Expect = e-100
 Identities = 240/805 (29%), Positives = 415/805 (51%), Gaps = 43/805 (5%)

Query: 22  RHGQLWPVTVALTLIIASIFALTALAQRMEQVIVKQGRDALTADTVFVSGNPLPESLLTL 81
           R   ++ + +AL L I++  A+    Q+++Q +  Q  + L AD V     PL +     
Sbjct: 15  RSSGIYLLIIALVLAISATTAVKFSNQQVQQAVALQAAEMLAADLVLSDTAPLEQKWFQQ 74

Query: 82  TAQQASQTSQMTRFATMAFSDQGMQLVTVKAVDSAYPLRGEMRLSDGQQTFNHVASNQLW 141
             Q     S++T F++M  +D    +V VKA+D A+PLRGE++ +   QT N     ++W
Sbjct: 75  ARQLGLAQSKVTVFSSMVHTDDQFVMVNVKAIDQAFPLRGELQSTSAAQTPN---PGEVW 131

Query: 142 LEPRVKDQLGVDIGDNVTIGDADFVVSGEVLEEPG--LSFNPFQQMPSVYIHASDVDKTG 199
           L PR  + L V +GD + I D  F V+ +++++    L F+ F   P+V IH  D+ +T 
Sbjct: 132 LSPRALELLKVKVGDQIQIADGSFNVAAKIVKDSNQELGFSGFS--PTVIIHQQDIARTE 189

Query: 200 AIQPGSRVQFSLFMTGDDSAIESIK-----------------QQVSLTASDRWRDQ-ESG 241
           AIQ GSRVQ+ L M G    +++ +                 +Q   T S + R+  E+ 
Sbjct: 190 AIQVGSRVQYRLLMAGSPQQVQAFEKGFEQLTGQKQKNKIDTEQAGETTSLQLRNAGEAN 249

Query: 242 SRTNEVFERTQQYLSLTVAIVILMAATTLVLTCQHYVSTRTHTIAMLKSLGASRRWLRRW 301
           +R  +  E    +L L   + IL+    + LT Q YV      +A+L+ LGAS+  +   
Sbjct: 250 TRLMKPLENLDTFLQLANILTILLCGIAIALTSQRYVMQNQDHLALLRCLGASKHSILWA 309

Query: 302 LALQVGLLLVFAVVLGSVIGVGLE-SLLRLPLKDLLPDPLPSYGLR-----PLWIALASS 355
             + + ++++ A+  G+++G+GL   LL+L L+ L+P+    +        PL +A+ +S
Sbjct: 310 YLILLVIIMLIAISFGAILGIGLGYGLLQLMLQ-LIPNLNIQFSALAMLQGPLPVAMFTS 368

Query: 356 FLIAVPALGIPLGRLLSVSAVAVMQPVTAQTRWQRNLLLIMVPIVPLLLVYWQNQLIWIV 415
            ++ +  +G  L +LL+   + V++    Q       +L+M+    L LV +   L   +
Sbjct: 369 AIVLLGFIGPSLWQLLNTPPIRVIR----QQEKSVVSILVMLSTGLLSLVIFSVVLTENL 424

Query: 416 LIGIVVLFAMLAVVSVLVTRLLAKLPLNPAMALALSRINRSGAASGLQFGALALSLMLLA 475
            +   V+ A++ + +VL   +   L +  A    +S   R+   + LQ  ALAL L L+ 
Sbjct: 425 RLTAWVMLAIILLCTVLYGLVWLILKILKAAKGRISAYVRTPYQTALQITALALGLSLIT 484

Query: 476 IIWLVRTDLLSDWQRTLPENAPNAFALNISESEKASYLAALDTASIERSAAYPIMRGRLT 535
           ++ ++RTD+L  WQ+ LP +APN F   +   +   +   +       +A YP +RGRLT
Sbjct: 485 VLAVLRTDMLERWQQQLPVDAPNQFVYGLPPFDLEPFQQQVRQNGWAGTALYPNIRGRLT 544

Query: 536 HINGQEAKQYAQNGEESSDALRRELNLTWAEQLPDYNPILQG--EWQSQNGVSVEQEVAS 593
             NGQ    ++    + S++L+RELNLT  +Q P  N I++G   +     VSVE + A 
Sbjct: 545 EKNGQP---FSSELIQKSNSLQRELNLTQTKQYPADNRIIEGAASFSRIGQVSVEAKTAE 601

Query: 594 DLGLKLGDTLTFMINSQTVSAQVNTIRQVEWREMKPNFYFIFSPDVVQNLPVSYLISFRI 653
           +LG+++GD L F +    + A+V  +R VEW    PNF+FIFSPD +     SYL SF +
Sbjct: 602 ELGIRVGDELGFSLPEGLLKARVINLRTVEWESFSPNFFFIFSPDTIDENAGSYLGSFYV 661

Query: 654 QPEHDALLGQLSRQHPTVSLMDIRTMGAKIQALLTQIVWSVTVLAALGVLAGVLLIFTLL 713
             E    L  L +Q P    +D+  +  +++ L+  +V  +TVLA L  ++G L++   L
Sbjct: 662 PEEDRPKLVNLIQQFPNTVFIDVSMILEQVKQLVNVLVQIITVLAVLVSISGFLVLLACL 721

Query: 714 RLSLSQRQQEIRLYRTLGASRRRVMHTIWAEYGVMALVGGLVASVSADAVVAAVMKWGFS 773
            L L +R+QE+ L R+ G+S+ ++   +  E G++  + G VA + A+ V++A+  +   
Sbjct: 722 NLLLDERKQEVALLRSFGSSKHKLKQMLSLEIGLIGFISGAVACLFAE-VISAIASYRME 780

Query: 774 LTPSLHMALWFVLPALTFCTLAAVV 798
           L   LH  +W  LP L    + A++
Sbjct: 781 LPIQLHAEIWLCLP-LVMTVVCAII 804