Pairwise Alignments

Query, 246 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 255 a.a., Lactam utilization protein LamB from Variovorax sp. SCN45

 Score =  188 bits (477), Expect = 1e-52
 Identities = 98/241 (40%), Positives = 144/241 (59%), Gaps = 1/241 (0%)

Query: 6   IQLNCDMGESFGVWTMGADEEVMPWIDMANIACGFHASDPHVMSRTIDLALEHEVMIGAH 65
           I LN D+GES GVW MG D  ++  +  AN+ACGFHA DP  + RT+  A +  V +GAH
Sbjct: 3   IDLNSDLGESLGVWRMGDDAAMLDIVSSANVACGFHAGDPAGILRTLRQAAQRGVAVGAH 62

Query: 66  PSYPDLQGFGRRSLAMNEQEVSEIILYQVGALKALCESKNGQLSYVKPHGALYNDMMSDP 125
            +Y DL GFGRR++ +   ++   ++YQ+GALK L  +    + YVKPHGALYN +  D 
Sbjct: 63  VAYRDLVGFGRRNMDVESADLRADVIYQIGALKGLAAAAGTTVRYVKPHGALYNTIAHDE 122

Query: 126 SIFRAVVDAVSCFNLPLMVLASANNQDYLDIADRFDVPLLFEAFADRTYLANGKLTPRSQ 185
              R V+ A+   +  L ++A A +   LD A+   V  + EAFADR Y   G L  R +
Sbjct: 123 RQARDVIAAIREIDPGLCLVALAGS-PLLDWAEAQGVRAVAEAFADRAYTPQGTLVSRRE 181

Query: 186 PNAVLSSEEAILNQVRQIARYGKVTSSDGFVIPIEADTLCVHGDNPNAVSLIARIRAALD 245
           P AVL   + +  ++ ++A  G VT+ DG  + I A+++CVHGD+P AV +  ++R  L 
Sbjct: 182 PGAVLHDAQDVAERMLRLAEEGVVTAIDGSTVRIRAESVCVHGDSPGAVGMARQVRERLS 241

Query: 246 E 246
           +
Sbjct: 242 Q 242