Pairwise Alignments

Query, 338 a.a., UDP-glucose 4-epimerase GalE from Vibrio cholerae E7946 ATCC 55056

Subject, 365 a.a., dTDP-L-rhamnose 4-epimerase from Xanthobacter sp. DMC5

 Score = 97.4 bits (241), Expect = 5e-25
 Identities = 96/343 (27%), Positives = 146/343 (42%), Gaps = 55/343 (16%)

Query: 3   VLVTGGMGYIGSHTCIQMIQAGMTPVILDNLYNSKVTVLDRIEKVIGVRPQFVQGDIRDK 62
           VL+TGG G+IG+H    ++  G    + D L      V  R   ++    + V GDIRD 
Sbjct: 4   VLITGGAGFIGAHVARALVARGTRVRVFDALIEQ---VHARPAAMLPQEVELVVGDIRDA 60

Query: 63  ALLVDLMQQHNIEAVVHFAGLKAVGESVQKPLEYYDNNVNGTLVLVAAMREAGVKSLVFS 122
             +   ++   ++AV+H A    VG+S+     Y   N  GT VL   + E  V+ +V +
Sbjct: 61  DAVGAALR--GVDAVIHLAAEVGVGQSMYAIDRYVGVNDLGTAVLFQKLIEQPVRRVVVA 118

Query: 123 SSATVYGEP---------------------------------TSVPITESFPTKAANPYG 149
           SS ++YGE                                    VP  E      A+ Y 
Sbjct: 119 SSMSIYGEGLYRTAEGRGVEDAERGKVGTGAWNPVDAEGLPLEPVPTPERKRPSLASVYA 178

Query: 150 RSKLMVEECLTDFQKANPDWSITLLRYFNPVGSHPSGELGEDPQGIPNNLMPFVTQVAVG 209
            +K  V+E LT    A        LR FN  G  P   L     G+   L  F  ++  G
Sbjct: 179 LTK-YVQEHLTLNVTAAYGMEGVALRLFNVYG--PGQALSNPYTGV---LAIFAARLLNG 232

Query: 210 RREYLSVFGSDYPTKDGTGVRDYIHVMDLADGHIAALKKVGTCAGLHIYNLGTGKGYSVL 269
           R   +         +DG   RD++HV D+A   +AAL+         +YN+G+G+  SVL
Sbjct: 233 RPPLV--------FEDGLQRRDFVHVSDVAQAFVAALEHPAAVG--RVYNIGSGQDRSVL 282

Query: 270 DVVKAFETASGRTVPYKLVDR-RPGDIAEYWADPTKAAQDLGW 311
           DV  +   A GR +  ++  + R GDI   +AD ++A  +LG+
Sbjct: 283 DVAGSLAKAMGRDISPEVTGKYRTGDIRHCFADISRARAELGY 325