Pairwise Alignments

Query, 473 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  192 bits (487), Expect = 4e-53
 Identities = 113/312 (36%), Positives = 181/312 (58%), Gaps = 1/312 (0%)

Query: 161 EGDLTSRLGFHPGRDEFGTIGCALDKAMDTLAELIVAVKQNSATLRDTAMTFAHEVKESE 220
           EGDLT RL      DE G I    +  +  L  +I  V  +   + D++   A     + 
Sbjct: 401 EGDLTRRLTSDRA-DELGAIANGFNTFLIKLQGMITQVVSSVQKVSDSSEHTADIAIRTN 459

Query: 221 VQIQNQYSSLDSVATAMEEMTASAAEVSTTSQRATEQTEQDTKQVERSQQRVRKAIQDIE 280
             +  Q   +D VATA+ EMTA+A +V+  + +A +      +   +  + VR     I 
Sbjct: 460 QGVHKQMVEIDQVATAVHEMTATAQDVARNATQAAQAASHADQAASQGMRIVRDTSTSIG 519

Query: 281 QLSRYIAQASSSVETLNTNATQINAVITTINAISEQTNLLALNAAIEAARAGEQGRGFAV 340
            L+  I +A S V+TL  ++  INA++T I  I+EQTNLLALNAAIEAARAGEQGRGFAV
Sbjct: 520 ALAEEIGKAVSVVQTLAKDSENINAILTAIRGIAEQTNLLALNAAIEAARAGEQGRGFAV 579

Query: 341 VADEVRTLASRTQSATVEIQAMIEKLQVESQNIAKLTEQTVSQAHTSSQLVSEVGNDVQA 400
           VADEVR LA +TQ AT EIQ MI++LQ  ++++ ++ E + S+   S Q  ++    ++ 
Sbjct: 580 VADEVRNLAQKTQKATEEIQTMIQQLQQGTRDVVRVMEDSQSRTDESVQHAAKAAEALET 639

Query: 401 IAHSAQLINDLSVQISTSASEQSSVAHDISSELSDIRSQSNTLRRVAEQTSQGVSEITQA 460
           I  +  +IND++ QI+++A EQS+VA DI+  + +I   +N +   A+++S   +++T+ 
Sbjct: 640 ITQAVSVINDMNTQIASAAEEQSAVAEDINRNVINIGQVANEVAGGADESSAASADLTKL 699

Query: 461 TRNLGEILARYR 472
                 ++ +++
Sbjct: 700 AEQQRRLINQFK 711