Pairwise Alignments

Query, 473 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 645 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  170 bits (430), Expect = 2e-46
 Identities = 114/386 (29%), Positives = 194/386 (50%), Gaps = 7/386 (1%)

Query: 93  ASATSANGQAYAYTESMKQYEQPAREQALRSFLLTYLWAIPFAIFTYWVATF---IGGAL 149
           A+  ++ G  + Y   ++  E  A E    ++L   +  +   IF    A F   I   +
Sbjct: 262 ANVWTSPGLGWRYIGLIEHREVMA-EATRMTYLTALIVGVLVLIFGLIAAAFSKVIVKPI 320

Query: 150 WVLYTTTQKIA--EGDLTSRLGFHPGRDEFGTIGCALDKAMDTLAELIVAVKQNSATLRD 207
             + T  Q IA  EGDL   L    G+DE   +    +K +  + +LI  +   SA L++
Sbjct: 321 GQVSTGLQSIAQGEGDLRHELQVQ-GKDETAELAGWFNKFLAAIRQLIQHIGAASANLQN 379

Query: 208 TAMTFAHEVKESEVQIQNQYSSLDSVATAMEEMTASAAEVSTTSQRATEQTEQDTKQVER 267
            +   +            Q  +++ V+TA  EM A+A EV+ +   A E  E   ++V  
Sbjct: 380 ASKVNSEVAHNMNEAAGRQREAVELVSTAFNEMVATANEVARSCSGAAESAENGHRRVAE 439

Query: 268 SQQRVRKAIQDIEQLSRYIAQASSSVETLNTNATQINAVITTINAISEQTNLLALNAAIE 327
            +Q++     ++ +L R + ++S ++  L   +  IN ++ TI AI+EQTNLLALNAAIE
Sbjct: 440 GKQQIEVTTDNVNRLGRRLTESSQAMVELEAGSRSINQILGTIRAIAEQTNLLALNAAIE 499

Query: 328 AARAGEQGRGFAVVADEVRTLASRTQSATVEIQAMIEKLQVESQNIAKLTEQTVSQAHTS 387
           AARAG+QGRGFAVVADEVR LA RT  +T EI+ ++  L+ ++Q + +     +  +  S
Sbjct: 500 AARAGDQGRGFAVVADEVRALAKRTSDSTGEIEQLLGTLENKTQEVTQKMGSCLDLSRAS 559

Query: 388 SQLVSEVGNDVQAIAHSAQLINDLSVQISTSASEQSSVAHDISSELSDIRSQSNTLRRVA 447
              +    +  + I  S   I D ++QIS +A EQ SVA +I+  +  I  ++  +  +A
Sbjct: 560 VSSIESARDSFEGIQTSVNEIRDQNLQISAAAEEQHSVAEEINRHIQQIYDEARLVESLA 619

Query: 448 EQTSQGVSEITQATRNLGEILARYRT 473
                    ++  +  L  ++ R+++
Sbjct: 620 NSAQDDSGRLSNLSDELNGLVGRFKS 645