Pairwise Alignments

Query, 473 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  176 bits (445), Expect = 3e-48
 Identities = 128/440 (29%), Positives = 214/440 (48%), Gaps = 38/440 (8%)

Query: 47  SIEQQSQLAVEYKLQGLLNHPDPSQLSVLKVQNRVSDTIYSQGVVTASATSANGQAYAYT 106
           ++ Q   LA   K Q L N         L +QN+  D         AS+ +       Y 
Sbjct: 243 ALGQNGLLATMRKAQQLEN--------ALLIQNQQVDASL------ASSLAKLDDMAKYA 288

Query: 107 ESMKQYEQPAREQALRSFLLTYLWAIPFAIFTYWVATFIGGALWVLYTTTQKI------- 159
            S+ Q  +   + A+ S      W +  +  +  VA  IG      YTT + I       
Sbjct: 289 GSIAQQSRMLADAAVSS---ANFWIMAVSAISAAVALVIG------YTTARSIQKPLQKI 339

Query: 160 -------AEGDLTSRLGFHPGRDEFGTIGCALDKAMDTLAELIVAVKQNSATLRDTAMTF 212
                  A GD+T R+ + P R EFG +  ++D   D   EL+  +   S  L + A   
Sbjct: 340 NHELAYMARGDMTRRINY-PTRCEFGALSRSIDILADKTGELLSQINAGSRHLVNEASRS 398

Query: 213 AHEVKESEVQIQNQYSSLDSVATAMEEMTASAAEVSTTSQRATEQTEQDTKQVERSQQRV 272
           A   + +  ++Q Q S  D VA A+ E+  SA EV+ ++  A ++ ++   + ++ +Q+V
Sbjct: 399 AEISERAMARVQEQKSQTDQVAAAITELEVSATEVARSTDGAKDEVDRADAEAKQGRQKV 458

Query: 273 RKAIQDIEQLSRYIAQASSSVETLNTNATQINAVITTINAISEQTNLLALNAAIEAARAG 332
               +  EQL+  +  A      L   +  I +++  I  I+EQTNLLALNAAIEAARAG
Sbjct: 459 ATTRRITEQLASDMESAVGITHKLGEFSNNIGSILDVIRGIAEQTNLLALNAAIEAARAG 518

Query: 333 EQGRGFAVVADEVRTLASRTQSATVEIQAMIEKLQVESQNIAKLTEQTVSQAHTSSQLVS 392
           + GRGFAVVADEVR LA+RTQ++T EIQ MIE LQ  S+ + ++  ++  Q     +   
Sbjct: 519 DAGRGFAVVADEVRALATRTQTSTEEIQHMIENLQESSKQVVEVMGRSQEQTRACVEQTR 578

Query: 393 EVGNDVQAIAHSAQLINDLSVQISTSASEQSSVAHDISSELSDIRSQSNTLRRVAEQTSQ 452
           E+ + +Q+IA     I +++ Q++ +A EQ  V+  ++  ++ I   ++   R A +++ 
Sbjct: 579 EMDSALQSIADRMGAIKEMADQVAHAAQEQIVVSQSVAHHVTGIAEVAHETEREARESAS 638

Query: 453 GVSEITQATRNLGEILARYR 472
               +        +++A ++
Sbjct: 639 SSEVLADLAAKQQQLIAHFK 658