Pairwise Alignments

Query, 473 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  178 bits (451), Expect = 5e-49
 Identities = 117/350 (33%), Positives = 187/350 (53%), Gaps = 8/350 (2%)

Query: 125 LLTYLWAIPFAIFTYWVATFIGGALWVLYTTTQKIAEGDLTSRLGFHP-GRDEFGTIGCA 183
           LL ++ A+     T+ +   I   L  + T    IAEG+L  RL     G DE G +  A
Sbjct: 199 LLAFMSAV-----TWLLTNLICSPLMQVVTQANAIAEGNLAHRLDRKTIGHDELGELADA 253

Query: 184 LDKAMDTLAELIVAVKQNSATLRDTAMTFAHEVKESEVQ-IQNQYSSLDSVATAMEEMTA 242
             K  + L  L+V     SAT    A+     V E   Q +Q Q   +  +ATAM EM +
Sbjct: 254 CSKMQNNL-RLMVEEIITSATQLAHAVDEVSAVSEQTSQGMQIQQEEVMQIATAMAEMKS 312

Query: 243 SAAEVSTTSQRATEQTEQDTKQVERSQQRVRKAIQDIEQLSRYIAQASSSVETLNTNATQ 302
           + AEV+  ++ A++ +   ++      Q++R     I+ +++ I +    V  L + A Q
Sbjct: 313 TVAEVARNTEVASDASRDSSQHANVGSQQMRAVNDSIQHVNQEIGRTEQRVLELESQAQQ 372

Query: 303 INAVITTINAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQSATVEIQAM 362
           IN V+  I+ I+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA +TQ +T +I  +
Sbjct: 373 INMVVDVISNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAGKTQQSTGDIVEI 432

Query: 363 IEKLQVESQNIAKLTEQTVSQAHTSSQLVSEVGNDVQAIAHSAQLINDLSVQISTSASEQ 422
           I+ LQ  +Q   + T  +    +   +   E    ++ I H +  I D+++QI+++  EQ
Sbjct: 433 IQNLQACAQKARETTNNSRELINHCVEQSQETQQAIEQIRHQSSQIADMTIQIASACGEQ 492

Query: 423 SSVAHDISSELSDIRSQSNTLRRVAEQTSQGVSEITQATRNLGEILARYR 472
            SV+ ++S  +  I   +  + + +   +Q  +E++Q    L + + R+R
Sbjct: 493 DSVSEELSRNIERINESAKQVAQGSSSAAQSCAELSQLASQLQDTVQRFR 542