Pairwise Alignments

Query, 473 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 433 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  203 bits (516), Expect = 1e-56
 Identities = 118/334 (35%), Positives = 194/334 (58%), Gaps = 1/334 (0%)

Query: 104 AYTESMKQYEQPAREQALRSFLLTYLWAIPFAIFTYWVATFIGGALWVLYTTTQKIAEGD 163
           A T S++  +Q      ++ F  T L  + F +   + A  +      L    + +A+ +
Sbjct: 65  AATNSVEVAQQHYDNYLVQVFWQTLLLIVVFVVLLLFAARVMLRQTQYLSDVIKLMAQRN 124

Query: 164 LTSRLGFHPGRDEFGTIGCALDKAMDTLAELIVAVKQNSATLRDTAMTFAHEVKESEVQI 223
           L+  +     +DE+G +   L+K    L +LI      S  L          + E++   
Sbjct: 125 LSEPIKMDC-KDEYGDVARELEKTRRQLQDLIKLQIDASQELTSLTEVMTMSMSETKDSA 183

Query: 224 QNQYSSLDSVATAMEEMTASAAEVSTTSQRATEQTEQDTKQVERSQQRVRKAIQDIEQLS 283
           Q +++ +D +ATAM EM+++   V+  +Q A+  TE  ++Q +  QQ V+  I  + +LS
Sbjct: 184 QEEFNEIDQLATAMSEMSSTVQTVAEHAQNASSLTENASQQAQTGQQFVKSTISKMSELS 243

Query: 284 RYIAQASSSVETLNTNATQINAVITTINAISEQTNLLALNAAIEAARAGEQGRGFAVVAD 343
           + I+ ++ +V  +      I++V+ TI +ISEQTNLLALNAAIEAARAGE GRGFAVVAD
Sbjct: 244 KDISSSAQAVNQVEERVVAISSVVGTIRSISEQTNLLALNAAIEAARAGEAGRGFAVVAD 303

Query: 344 EVRTLASRTQSATVEIQAMIEKLQVESQNIAKLTEQTVSQAHTSSQLVSEVGNDVQAIAH 403
           EVR LA RTQ+ATVEIQ MI +LQ  + +   L E++V QA    +L++  G+++  I +
Sbjct: 304 EVRNLAQRTQNATVEIQEMISQLQSSANSAVNLMEKSVVQAADGVELITNAGSELDGIVN 363

Query: 404 SAQLINDLSVQISTSASEQSSVAHDISSELSDIR 437
             QL+ND++ QI+ +A +QS+VA +++  L+++R
Sbjct: 364 QVQLLNDMNFQIAAAAGQQSNVAEEMNENLNNVR 397



 Score = 35.8 bits (81), Expect = 3e-06
 Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 14/98 (14%)

Query: 354 SATVEIQAMIEKLQVESQNIAKLTEQTVSQAHTSSQLVSEVGNDVQAIAHSAQLINDLSV 413
           +A  E+ + ++ +   +QN + LTE    QA T  Q V            +   +++LS 
Sbjct: 195 TAMSEMSSTVQTVAEHAQNASSLTENASQQAQTGQQFVKS----------TISKMSELSK 244

Query: 414 QISTSASEQSSVAHDISSELSDIRSQSNTLRRVAEQTS 451
            IS+SA   + V   + +    I S   T+R ++EQT+
Sbjct: 245 DISSSAQAVNQVEERVVA----ISSVVGTIRSISEQTN 278