Pairwise Alignments

Query, 473 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  187 bits (475), Expect = 8e-52
 Identities = 116/331 (35%), Positives = 190/331 (57%), Gaps = 1/331 (0%)

Query: 141 VATFIGGALWVLYTTTQKIAEGDLTSRLGFHPGRDEFGTIGCALDKAMDTLAELIVAVKQ 200
           +A  +  A+  L ++   IA GDLT R+    G DEF  I   +++ + +  E+I + + 
Sbjct: 265 IAKRVNNAVHHLASSATHIAAGDLTQRIPV-TGNDEFSDIAKYVNRIVTSFQEVISSNRH 323

Query: 201 NSATLRDTAMTFAHEVKESEVQIQNQYSSLDSVATAMEEMTASAAEVSTTSQRATEQTEQ 260
           + + L   A   A    +++  I  Q S    +A A+ + TA+  EV+ ++  A E +E+
Sbjct: 324 SVSALATAAEENAAVAMQTKQNIVEQQSQTQQIAAAIHQFTATVHEVAQSAGLAAEASEE 383

Query: 261 DTKQVERSQQRVRKAIQDIEQLSRYIAQASSSVETLNTNATQINAVITTINAISEQTNLL 320
             +   + ++ V + I  IE LS  + +  ++++ L  ++  I +V+  I +ISEQTNLL
Sbjct: 384 AEQAAMQGRKVVEENIAMIEGLSNDLQKMLAAMQLLAKDSEDIGSVVDVIQSISEQTNLL 443

Query: 321 ALNAAIEAARAGEQGRGFAVVADEVRTLASRTQSATVEIQAMIEKLQVESQNIAKLTEQT 380
           ALNAAIEAARAGEQGRGFAVVADEVRTLASRTQ +T +I   +++LQ  S++ A L EQ 
Sbjct: 444 ALNAAIEAARAGEQGRGFAVVADEVRTLASRTQESTKQILQTVQRLQQSSRDSANLIEQG 503

Query: 381 VSQAHTSSQLVSEVGNDVQAIAHSAQLINDLSVQISTSASEQSSVAHDISSELSDIRSQS 440
           VS A  + +     G  +  I  +   I+ ++ QI+T++ EQS+V  +I+  +  I   S
Sbjct: 504 VSGASKAVEKARLAGTALSQITANVDRISTMNTQIATASEEQSAVTEEINKNIITISEIS 563

Query: 441 NTLRRVAEQTSQGVSEITQATRNLGEILARY 471
           N     A+Q+S+   E+ +   ++ + +ARY
Sbjct: 564 NQTALGAQQSSEATLELARLAESMQQEVARY 594