Pairwise Alignments

Query, 473 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  187 bits (476), Expect = 6e-52
 Identities = 119/342 (34%), Positives = 186/342 (54%), Gaps = 9/342 (2%)

Query: 136 IFTYWVATFIGGALWVLYTTTQKIAEGDLTSRLGFHP-GRDEFGTIGCALDKAMDTLAEL 194
           + T+ +   I G L ++   +  IA+GDL+  +     G DE GT+  A ++    L +L
Sbjct: 204 LMTWLLTRLICGPLAIVMKQSNAIAKGDLSQTMDRSSIGNDELGTLANASEQMQQNLRQL 263

Query: 195 IVAVKQNSATLRDTAMTFAHEVKESEVQIQNQYSSLDSVATAMEEMTASAAEVSTTSQRA 254
           I  +      L            +S   ++ Q   +  VATAM +M A+ A+V+  ++ +
Sbjct: 264 IDEIISAVTQLSSAVEEMTQISNQSADGMKEQQYQITQVATAMAQMKAAVADVARNTEDS 323

Query: 255 TEQTEQDTKQVERSQQRVRKAIQDIEQLSRYIAQASSSVETLNTNATQINAVITTINAIS 314
             Q      + +   +     ++ I+Q++  I +A  +V  L   ++QIN V+  I +I+
Sbjct: 324 ASQAMAANHKSQEGARENASMVRSIQQVADIIGEAGQTVSELEQQSSQINVVVDVIRSIA 383

Query: 315 EQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQSATVEIQAMIEKLQVESQNIA 374
           +QTNLLALNAAIEAARAGE GRGFAVVADEVRTLA RTQ +T EI  +IEKLQV    +A
Sbjct: 384 DQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAGRTQDSTGEITTIIEKLQV----MA 439

Query: 375 KLTEQTVSQAHTSSQLVSEVGNDVQ----AIAHSAQLINDLSVQISTSASEQSSVAHDIS 430
           K  +    ++ +S     E GN  Q    +I  S   I D+  QI+++ SEQ SVA ++S
Sbjct: 440 KQAKDATERSRSSIDKCVEQGNHSQSLMISIEESIANIADVGTQIASACSEQDSVADELS 499

Query: 431 SELSDIRSQSNTLRRVAEQTSQGVSEITQATRNLGEILARYR 472
             + +I   S  + + ++QT+Q   E+TQ   +L + L R++
Sbjct: 500 RNVENIHLASQEVAQGSQQTAQACRELTQLAVSLQDTLRRFK 541



 Score = 37.7 bits (86), Expect = 1e-06
 Identities = 39/198 (19%), Positives = 85/198 (42%), Gaps = 17/198 (8%)

Query: 288 QASSSVETLNTNATQINAVITTINAISE--QTNLLALNAAIEAARAGEQGRG-------- 337
           Q  SSV+TLN+ +   N  I  I  +     T L+    AI   ++    +G        
Sbjct: 179 QILSSVKTLNSTSVASNIAILAIMVLMTWLLTRLICGPLAIVMKQSNAIAKGDLSQTMDR 238

Query: 338 FAVVADEVRTLASRTQSATVEIQAMIEKLQVESQNIAKLTEQTVSQAHTSSQLVSE---- 393
            ++  DE+ TLA+ ++     ++ +I+++      ++   E+    ++ S+  + E    
Sbjct: 239 SSIGNDELGTLANASEQMQQNLRQLIDEIISAVTQLSSAVEEMTQISNQSADGMKEQQYQ 298

Query: 394 VGNDVQAIAHSAQLINDLSVQISTSASEQSSVAHDISSELSDIRSQSNTLRRVAE---QT 450
           +     A+A     + D++     SAS+  +  H       +  S   ++++VA+   + 
Sbjct: 299 ITQVATAMAQMKAAVADVARNTEDSASQAMAANHKSQEGARENASMVRSIQQVADIIGEA 358

Query: 451 SQGVSEITQATRNLGEIL 468
            Q VSE+ Q +  +  ++
Sbjct: 359 GQTVSELEQQSSQINVVV 376