Pairwise Alignments

Query, 422 a.a., DEAD/DEAH box helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 563 a.a., ATP-dependent helicase from Magnetospirillum magneticum AMB-1

 Score =  312 bits (800), Expect = 1e-89
 Identities = 175/393 (44%), Positives = 246/393 (62%), Gaps = 7/393 (1%)

Query: 7   TFSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLIQ 66
           TF  LGL   +L  L+E G  +PTPIQ QAIP VL G+DVL  AQTGTGKTA+F LP+I+
Sbjct: 19  TFEDLGLGPEILKALAESGYTHPTPIQAQAIPVVLMGRDVLGCAQTGTGKTASFTLPMIE 78

Query: 67  RFIEQPWQREANSKEIRALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSMKVQLN 126
                     A ++  R+L+L PTRELA QV ++   Y K   LK   + GG SM  Q+ 
Sbjct: 79  ILAAG----RAKARMPRSLILAPTRELAAQVAENFDKYGKYHPLKKALIIGGESMSDQVA 134

Query: 127 HLRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRRLSPL 186
            L  GVD+LIATPGRLLD      + L  V+VLV+DEADRMLDMGF+PD+++++  L  +
Sbjct: 135 LLDRGVDVLIATPGRLLDMFERGRILLNDVKVLVIDEADRMLDMGFIPDVEKIVGLLPKI 194

Query: 187 RQTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAETVQQMVYPVDKKRKRELLSYLI 246
           RQTLFFSAT   +I+ +A   + +P EV+V+   S A TV Q +  V++  KRE L +LI
Sbjct: 195 RQTLFFSATMGPEIRRLADAFLMNPKEVKVSTGASAATTVVQALAVVEEIDKRETLRHLI 254

Query: 247 GSKNWQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGKVRALI 306
             +  +   +F   ++  D L   LK  G   V ++GD +Q AR + L+ FK G+ R ++
Sbjct: 255 RIEEVKNAFIFCNRKRDVDVLFRSLKKHGFDVVQLHGDMAQSARGETLEKFKKGEARLMV 314

Query: 307 ATDVAARGLDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLSHDEQPQLEAI 366
            +DVAARG+DI+ +  V N+D+P  AEDYVHRIGRTGRAG+ G A ++ S D+   + AI
Sbjct: 315 CSDVAARGIDISAVSHVFNFDVPIHAEDYVHRIGRTGRAGMEGHAFTIASPDDGRFVGAI 374

Query: 367 ERLLNTRLPQEWLKGFEPSPVVHEENSPRRSAG 399
           E ++ T +P+  ++G    P +  + + R+  G
Sbjct: 375 EAMIGTTIPRISVEGV---PALDLDMTARKGRG 404