Pairwise Alignments

Query, 422 a.a., DEAD/DEAH box helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 416 a.a., Superfamily II DNA and RNA helicases from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  338 bits (867), Expect = 2e-97
 Identities = 177/412 (42%), Positives = 266/412 (64%), Gaps = 4/412 (0%)

Query: 8   FSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLIQR 67
           F  L +   +L  L + G   PT IQ QAIPH+L+G+DVL  AQTGTGKTAAF +P+IQ 
Sbjct: 3   FKDLRIIPPILKALEDKGYDEPTSIQAQAIPHILEGRDVLGCAQTGTGKTAAFAIPIIQH 62

Query: 68  FIEQPWQREANSKEIRALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSMKVQLNH 127
             E P+  E  +K IR+L++ PTRELA Q+ +++  YAK T +    ++GG     Q+  
Sbjct: 63  IHEAPYANEPWAK-IRSLIVTPTRELAIQIGENIDEYAKNTNVSHTVIFGGVKQGAQVAQ 121

Query: 128 LRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRRLSPLR 187
           L+ GV IL+ATPGRLLD      + L  +++ VLDEADRMLDMGF+ D++++L+ L   R
Sbjct: 122 LKKGVHILVATPGRLLDLIDQGHISLKAIDLFVLDEADRMLDMGFINDIKKLLKILPKKR 181

Query: 188 QTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAETVQQMVYPVDKKRKRELLSYLIG 247
           Q+LFFSAT    I  ++  I+ +P +V+VTP +STAET+QQ +Y  +K  K+ LL +++ 
Sbjct: 182 QSLFFSATMPDNILQLSKEILDNPQKVEVTPVSSTAETIQQYIYYTNKSSKKSLLIHILE 241

Query: 248 SKNWQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGKVRALIA 307
            +   QVL+F++T+ G+D +  +LK   IKA +I+GDK+Q  RQ+ L DFK  K+R L+A
Sbjct: 242 KEGMDQVLLFSRTKHGADRIVRDLKKKHIKAAAIHGDKAQNQRQRVLSDFKDNKLRVLVA 301

Query: 308 TDVAARGLDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLSHDEQPQLEAIE 367
           TD+AARG+DI +L+ V+N+D+P   E Y+HRIGR+GRAG  G A+SL   +E   ++AIE
Sbjct: 302 TDIAARGIDIDKLKYVINFDIPDTPETYIHRIGRSGRAGEEGTAISLCEPEENADVKAIE 361

Query: 368 RLLNTRLPQEWLKGFEPSPVVHEENSPRRSAGRSSEKRKLKAQLKIHAQRGK 419
           +L N  +    +    P P   +  + +     + EK++ K +   + ++ +
Sbjct: 362 KLANKNIT---VISDHPFPQTDKPMTAQEKKEFNKEKQRRKQEFFANRKKNR 410