Pairwise Alignments

Query, 242 a.a., arginine ABC transporter ATP-binding protein ArtP from Vibrio cholerae E7946 ATCC 55056

Subject, 254 a.a., ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  213 bits (541), Expect = 4e-60
 Identities = 107/240 (44%), Positives = 162/240 (67%), Gaps = 5/240 (2%)

Query: 3   IRVKGINKSYGTTQVLHDIHFECASGETLVLLGPSGAGKSSLLRVLNLLETADNGQLHIA 62
           I V+G+ K +G  +VL  +      GE + L+GPSG+GKS++LR +N LE+ + G++   
Sbjct: 2   IHVEGLEKRFGAHRVLQGVSLRVDKGEVVCLIGPSGSGKSTVLRCINGLESYEGGEVRAF 61

Query: 63  NQSFDFSTHPTEQQGLALRRKVGMVFQQYHLWPHMTVLENLVEAPVKVAGMAKSQAKQQA 122
            +  D +     +    LR ++GMVFQ+++L+PH TVLEN++E PV V   + +QA+++A
Sbjct: 62  GERVDRNAPGIHR----LRSRMGMVFQRFNLFPHRTVLENVMEGPVHVLRQSAAQAREEA 117

Query: 123 IEILKTLQLADKADAWPLQLSGGQQQRVAIARALMMKPDVLLFDEPTAALDPEITNQVVK 182
           + +L  + LA+KA AWP QLSGGQQQRVAIARAL MKP+ +LFDEPT+ALDPE+   V+ 
Sbjct: 118 LALLAKVGLAEKAQAWPAQLSGGQQQRVAIARALAMKPEAMLFDEPTSALDPELVGDVLG 177

Query: 183 IIKELSGTGITQVVVTHEVDFAKKIASHVLYLEKGRIVEHGTHAS-FTHPQTQQFADYLK 241
           +++ L+  G+T +VVTHE+ FA+++A  V +L  G IVE G  A     P+  +  D+L+
Sbjct: 178 VMRALADEGMTMIVVTHEMGFAREVADRVCFLHSGSIVEEGPSAQVLGSPRQARTQDFLR 237