Pairwise Alignments

Query, 242 a.a., arginine ABC transporter ATP-binding protein ArtP from Vibrio cholerae E7946 ATCC 55056

Subject, 250 a.a., predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) from Escherichia coli BW25113

 Score =  209 bits (532), Expect = 4e-59
 Identities = 109/243 (44%), Positives = 163/243 (67%), Gaps = 6/243 (2%)

Query: 2   SIRVKGINKSYGTTQVLHDIHFECASGETLVLLGPSGAGKSSLLRVLNLLETADNGQLHI 61
           +I VK + K +    VLH I  E   GE + ++GPSG+GK++LLR +NLLE  + G + +
Sbjct: 3   AIEVKNLVKKFHGQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRSINLLEQPEAGTITV 62

Query: 62  ANQSFDFSTHPTEQQGLA--LRRKVGMVFQQYHLWPHMTVLENLVEAPVKVAGMAKSQAK 119
            + + D +   ++Q+ L   LR+ VG VFQ ++L+PH TVLEN++E PV V G  K +A 
Sbjct: 63  GDITIDTARSLSQQKSLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEAT 122

Query: 120 QQAIEILKTLQLADKADAWPLQLSGGQQQRVAIARALMMKPDVLLFDEPTAALDPEITNQ 179
            +A E+L  + LA K  ++P +LSGGQQQRVAIARAL M+P+V+LFDEPT+ALDPE+  +
Sbjct: 123 ARARELLAKVGLAGKETSYPRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGE 182

Query: 180 VVKIIKELSGTGITQVVVTHEVDFAKKIASHVLYLEKGRIVEHGT----HASFTHPQTQQ 235
           V+  I++L+    T V+VTHE+ FA+ +A   +++++GRIVE G      A    P+T+Q
Sbjct: 183 VLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGAAKALFADPEQPRTRQ 242

Query: 236 FAD 238
           F +
Sbjct: 243 FLE 245