Pairwise Alignments

Query, 243 a.a., arginine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 250 a.a., L-arginine ABC transporter - periplasmic binding subunit from Pseudomonas putida KT2440

 Score =  159 bits (403), Expect = 4e-44
 Identities = 89/245 (36%), Positives = 141/245 (57%), Gaps = 9/245 (3%)

Query: 2   KKILLASLIGLV-SASAAAQQEIKFVMEATYAPFEYMDENNQIQGFDVDLANALCKQLEA 60
           KK LLA+   LV SA+A A ++++  +EA Y PF   D +  + GFD D+ +ALC +++ 
Sbjct: 5   KKFLLAAAATLVMSANAMAAEKLRMGIEAAYPPFNNKDASGNVVGFDKDIGDALCAKMKV 64

Query: 61  KCSFHNQAFDSLIPALKFKRYDAAISAMDITEARLEQVNFSNPYYDNSAAFVSLAGK--V 118
           +CS     +D +IPAL  K++D  +S++ IT+ R + V+F+NPYY N   F++       
Sbjct: 65  ECSVVTSDWDGIIPALNAKKFDFLVSSLSITDERKQAVDFTNPYYSNKLQFIAPKNVDFK 124

Query: 119 ADQAALKGKRVGVQNGSTHQSFLLEQLSDVVAVPYSSYQDAFIDMKNGRIDSVFGDTAVV 178
            D+ +LKGK +G Q  +   ++L +   DV    Y + ++A++D+ +GRID +  D  V 
Sbjct: 125 TDKESLKGKVIGTQRATLAGTYLEDNYPDVEIKLYDTQENAYLDLVSGRIDGILADKYVQ 184

Query: 179 AEWFKG--DNNLAYVGERVTNAQYFGNGFGIAVNKDNQALLDQLNAALEAVKENGEYAAI 236
            EW K    +N  + GE V ++    +  GIAV K +  L D LN AL  +K +G Y  I
Sbjct: 185 YEWLKSKDGSNFEFKGEPVMDS----DKIGIAVRKGDTKLRDDLNKALAEIKADGTYKKI 240

Query: 237 FNKYF 241
            +KYF
Sbjct: 241 NDKYF 245