Pairwise Alignments

Query, 243 a.a., arginine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 250 a.a., ABC transporter arginine-binding protein 1 from Pseudomonas sp. DMC3

 Score =  153 bits (386), Expect = 4e-42
 Identities = 83/245 (33%), Positives = 141/245 (57%), Gaps = 9/245 (3%)

Query: 2   KKILLASLIGLVSASAAAQQEIKFVMEATYAPFEYMDENNQIQGFDVDLANALCKQLEAK 61
           KK+ LA+ + L  ++ A  + +K  +EA Y PF   D + Q+ GFD ++ +ALC +++A+
Sbjct: 5   KKVFLAAAVTLAFSAGAMAETLKMGIEAAYPPFNNKDASGQVVGFDKEIGDALCAKMKAE 64

Query: 62  CSFHNQAFDSLIPALKFKRYDAAISAMDITEARLEQVNFSNPYYDNSAAFVS--LAGKVA 119
           CS     +D +IPAL  K++D  IS++ ITE R   V+F++PYY N   F++        
Sbjct: 65  CSVVTSDWDGIIPALNAKKFDFLISSLSITEERKAAVDFTDPYYSNKLQFIAPKSVDFKT 124

Query: 120 DQAALKGKRVGVQNGSTHQSFLLEQLSDVVAVP-YSSYQDAFIDMKNGRIDSVFGDTAVV 178
           D+ +LKGK +G Q  +   ++L +   D + V  Y + ++A++D+ +GR+D++  D    
Sbjct: 125 DKDSLKGKTIGTQRATLAGTWLEDTYGDDIKVSLYDTQENAYLDLTSGRVDAILADKYAN 184

Query: 179 AEWFKGD--NNLAYVGERVTNAQYFGNGFGIAVNKDNQALLDQLNAALEAVKENGEYAAI 236
            +W K D   N  + G+ V  +    +  GIAV K +  L ++LNAAL+ +  +G Y  I
Sbjct: 185 YDWLKTDAGKNYEFKGDPVVES----DKIGIAVRKGDNELRNKLNAALKEIVADGTYKKI 240

Query: 237 FNKYF 241
            +KYF
Sbjct: 241 NDKYF 245