Pairwise Alignments

Query, 243 a.a., arginine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 261 a.a., ABC transporter substrate-binding protein from Pseudomonas fluorescens SBW25

 Score =  186 bits (472), Expect = 4e-52
 Identities = 103/251 (41%), Positives = 148/251 (58%), Gaps = 10/251 (3%)

Query: 1   MKKILLASLIGLVSASAAAQQE---IKFVMEATYAPFEYMDENNQIQGFDVDLANALCKQ 57
           MKK++L   + L   S  A  E   +K  +EA Y PF     +  I GFD D+ NALCKQ
Sbjct: 1   MKKLVLLGALALSVLSMQAFAEGKPLKIGIEAAYPPFASKAPDGSIVGFDYDIGNALCKQ 60

Query: 58  LEAKCSFHNQAFDSLIPALKFKRYDAAISAMDITEARLEQVNFSNPYYDNSAAFVSLAGK 117
           ++ KC++  Q FD LIPALK ++ DA +S+M ITE R + V+F+N YY + A  V   G 
Sbjct: 61  MDVKCTWVEQEFDGLIPALKVRKIDAILSSMSITEDRKKSVDFTNRYYLSPAQLVMKEGT 120

Query: 118 VADQA--ALKGKRVGVQNGSTHQSFLLEQLS--DVVAVPYSSYQDAFIDMKNGRIDSVFG 173
               +   LKGK++GVQ GS H  F  E L+      VPYSS  + ++D++ GR+D    
Sbjct: 121 TVSDSLDELKGKKIGVQRGSIHDRFAKEVLAPKGATVVPYSSQNEIYLDVEAGRLDGTVA 180

Query: 174 DTAVVAEWF---KGDNNLAYVGERVTNAQYFGNGFGIAVNKDNQALLDQLNAALEAVKEN 230
           D  ++ + F         A+VG + T+ +YFG+G GIAV K ++  LD++NAA+ A++ N
Sbjct: 181 DATLLQDGFLKTPAGKGYAFVGPQFTDPKYFGDGIGIAVRKGDKENLDRINAAIAAIRAN 240

Query: 231 GEYAAIFNKYF 241
           GEY  I +KYF
Sbjct: 241 GEYKKIQDKYF 251