Pairwise Alignments

Query, 243 a.a., arginine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 259 a.a., ABC transporter substrate-binding protein from Serratia liquefaciens MT49

 Score =  144 bits (362), Expect = 2e-39
 Identities = 80/252 (31%), Positives = 138/252 (54%), Gaps = 11/252 (4%)

Query: 1   MKKILLASLIGLVSASAAAQQEIKFVMEATYAPFEYMDENNQIQGFDVDLANALCKQLEA 60
           +K ++ A  +    ++ AA+  ++F +EA Y PFE    + Q+ GFD+DL NA+C   + 
Sbjct: 4   LKTLIAAGCLLAAGSTLAAENTLRFGLEALYPPFESKSASGQLVGFDIDLGNAVCAAAQL 63

Query: 61  KCSFHNQAFDSLIPALKFKRYDAAISAMDITEARLEQVNFSNPYYDNSAAFVSLA--GKV 118
           KCS+   +FDSLIPALK +++DA  SAM++T+ R + ++F++  Y      ++ A  G +
Sbjct: 64  KCSWVETSFDSLIPALKARKFDAINSAMNVTDQRRQAIDFTDSIYQVPNRLIAKADSGLL 123

Query: 119 ADQAALKGKRVGVQNGSTHQSFLLEQLS--DVVAVPYSSYQDAFIDMKNGRIDSVF---- 172
            +  +L GK VGV  GS  +++     +   V  V Y     A++D+  GR+D+      
Sbjct: 124 PNATSLAGKHVGVLQGSIQETYAKAHWAPQGVDVVSYQDQNQAYLDLTAGRLDATLVMAP 183

Query: 173 -GDTAVVAEWFKGDNNLAYVGERVTNAQYFGNGFGIAVNKDNQALLDQLNAALEAVKENG 231
            G +  +A         A+VG+ V++ +  G G    + K ++AL  +LN A+  VK+ G
Sbjct: 184 SGQSGFLAH--PDGKGFAFVGDAVSDDKILGEGIAFGLRKGDEALKKKLNEAIVKVKQQG 241

Query: 232 EYAAIFNKYFGN 243
             + +  KYFG+
Sbjct: 242 TVSELAKKYFGD 253