Pairwise Alignments

Query, 243 a.a., arginine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., lysine/arginine/ornithine transporter subunit (NCBI) from Escherichia coli BW25113

 Score =  149 bits (377), Expect = 4e-41
 Identities = 86/253 (33%), Positives = 139/253 (54%), Gaps = 12/253 (4%)

Query: 1   MKKILLAS--LIGLVSAS---AAAQQEIKFVMEATYAPFEYMDENNQIQGFDVDLANALC 55
           MKK +LA   L+GL +A+   AA  + ++   + TYAPF   D      GFD+DL N +C
Sbjct: 1   MKKSILALSLLVGLSTAASSYAALPETVRIGTDTTYAPFSSKDAKGDFVGFDIDLGNEMC 60

Query: 56  KQLEAKCSFHNQAFDSLIPALKFKRYDAAISAMDITEARLEQVNFSNPYYDNSAAFVSLA 115
           K+++ KC++    FD+LIP+LK K+ DA IS++ IT+ R +++ FS+  Y   +  ++  
Sbjct: 61  KRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIAAK 120

Query: 116 GKVADQA--ALKGKRVGVQNGSTHQSFLLE--QLSDVVAVPYSSYQDAFIDMKNGRIDSV 171
           G        +LKGK VGV  GST +++  E  +   V  V Y++    + D+  GR+D+ 
Sbjct: 121 GSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVDVVAYANQDLVYSDLAAGRLDAA 180

Query: 172 FGDTAVVAEWF---KGDNNLAYVGERVTNAQYFGNGFGIAVNKDNQALLDQLNAALEAVK 228
             D    +E F       + A+ G  V + +YFG+G G+ + KD+  L    N AL  ++
Sbjct: 181 LQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDDAELTAAFNKALGELR 240

Query: 229 ENGEYAAIFNKYF 241
           ++G Y  +  KYF
Sbjct: 241 QDGTYDKMAKKYF 253