Pairwise Alignments

Query, 243 a.a., arginine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., lysine-arginine-ornithine-binding periplasmic protein from Enterobacter asburiae PDN3

 Score =  148 bits (373), Expect = 1e-40
 Identities = 91/255 (35%), Positives = 139/255 (54%), Gaps = 16/255 (6%)

Query: 1   MKKILLAS--LIGLVSAS---AAAQQEIKFVMEATYAPFEYMDENNQIQGFDVDLANALC 55
           MKK +LA   L+GL +A+   AA  Q ++   +ATYAPF   D      GFD+DL N +C
Sbjct: 1   MKKTVLALSLLVGLSAAAGSYAALPQTVRIGTDATYAPFSSKDAKGDFVGFDIDLGNEMC 60

Query: 56  KQLEAKCSFHNQAFDSLIPALKFKRYDAAISAMDITEARLEQVNFSNPYYDNSAAFVSLA 115
           K++  KC++    FD+LIP+LK K+ DA IS++ ITE R +++ FS+  Y   +  ++  
Sbjct: 61  KRIAVKCTWVGSDFDALIPSLKAKKIDAIISSLSITEKRQQEIAFSDKLYAADSRLIAPK 120

Query: 116 GKVADQA--ALKGKRVGVQNGSTHQSFL----LEQLSDVVAVPYSSYQDAFIDMKNGRID 169
           G        +LKGK VGV  GST + +      E+  DVVA  Y +    + D+  GR+D
Sbjct: 121 GSPIKPTIDSLKGKHVGVLQGSTQEGYANATWREKGVDVVA--YQNQDLIYSDLAAGRLD 178

Query: 170 SVFGDTAVVAEWF---KGDNNLAYVGERVTNAQYFGNGFGIAVNKDNQALLDQLNAALEA 226
           + F D    +E F       + A+ G  V + +YFG+G GI + KD+  L    + A   
Sbjct: 179 AAFQDEVAASEGFLKQPAGKDYAFAGPSVKDKKYFGDGTGIGLRKDDTELKAAFDKAFAE 238

Query: 227 VKENGEYAAIFNKYF 241
           ++++G Y  +  KYF
Sbjct: 239 LRKDGTYDKLAKKYF 253