Pairwise Alignments

Query, 243 a.a., arginine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 259 a.a., transporter substrate-binding domain-containing protein from Dickeya dianthicola ME23

 Score =  149 bits (377), Expect = 4e-41
 Identities = 92/252 (36%), Positives = 137/252 (54%), Gaps = 11/252 (4%)

Query: 1   MKKIL----LASLIGLVSASAAAQQEIKFVMEATYAPFEYMDENNQIQGFDVDLANALCK 56
           MKK+L    LA +    SA A   + IK   + TYAPFE  D + Q+ GFD+DLA  LCK
Sbjct: 1   MKKMLKFLPLALVFAAGSALAEVPKNIKIGTDPTYAPFESKDASGQLVGFDIDLAKELCK 60

Query: 57  QLEAKCSFHNQAFDSLIPALKFKRYDAAISAMDITEARLEQVNFSNPYYDNSAAFVSLAG 116
           +++A C+F    FD+LIP+LK K+ DA IS++ ITE R +++ F++  Y  +A  ++  G
Sbjct: 61  RIQANCTFVESDFDALIPSLKAKKIDAIISSLSITEKRQQEIAFTDKLYAANARLIAKKG 120

Query: 117 K--VADQAALKGKRVGVQNGSTHQSFLLE--QLSDVVAVPYSSYQDAFIDMKNGRIDSVF 172
              +    ALKGKRVGV   ST +S+  +  Q   V  V Y +    + D+  GRID+ F
Sbjct: 121 SPILPTLDALKGKRVGVLQASTQESYANQYWQPKGVDVVAYQNQDLIYADLTAGRIDAAF 180

Query: 173 GDTAVVAEWF---KGDNNLAYVGERVTNAQYFGNGFGIAVNKDNQALLDQLNAALEAVKE 229
            D    +E F         A+ G  V + + FG G G+ + K+   L   L+ A   +++
Sbjct: 181 QDEVAGSEGFLKQAAGKEYAFAGPAVKDDKLFGVGTGMGLRKNETELKAALDKAFATLRK 240

Query: 230 NGEYAAIFNKYF 241
           +G Y  +  KYF
Sbjct: 241 DGTYDKLAKKYF 252