Pairwise Alignments

Query, 243 a.a., arginine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 256 a.a., ABC transporter, substrate binding protein (amino acid) from Agrobacterium fabrum C58

 Score =  131 bits (329), Expect = 1e-35
 Identities = 79/243 (32%), Positives = 132/243 (54%), Gaps = 6/243 (2%)

Query: 5   LLASLIGLVSASAAAQQEIKFVMEATYAPFEYMDENNQIQGFDVDLANALCKQLEAKCSF 64
           LLA     VSA  A+      +M  +Y PF   D + + QG+++DL +A+C +++ KCS 
Sbjct: 7   LLAGTAFAVSAFTASADVRFGIMNESYPPFFAKDASGKWQGWEIDLMDAVCAEMKEKCSI 66

Query: 65  HNQAFDSLIPALKFKRYDAAISAMDITEARLEQVNFSNPYYDNSAAFVSLAGKVADQAA- 123
              ++D LIPAL+ K++D   S+M  T+ R + ++F+N YY+  +  +   G+    A  
Sbjct: 67  VELSWDGLIPALQTKKFDVIWSSMSNTQEREKVIDFTNKYYNTPSKLIGAKGEKPGAAPE 126

Query: 124 -LKGKRVGVQNGSTHQSFLLEQLSDVV-AVPYSSYQDAFIDMKNGRIDSVFGDTAVVAEW 181
            +KGK +G+Q  +    +  +  + V     Y +  +AF D+  GRID VFGD+ V+  +
Sbjct: 127 DVKGKTIGIQVATIQSEYYKKYFAAVADEKTYQTLDEAFQDLAAGRIDYVFGDSLVLDAF 186

Query: 182 FKGD---NNLAYVGERVTNAQYFGNGFGIAVNKDNQALLDQLNAALEAVKENGEYAAIFN 238
            K D   +  A +G    + +  G G    + KD+  L ++LNAA+ AV+ +G+Y  I  
Sbjct: 187 VKSDAGKDCCADMGNVADDKEIMGLGVSGGLRKDDTELKNKLNAAIAAVRASGKYDEITK 246

Query: 239 KYF 241
           KYF
Sbjct: 247 KYF 249