Pairwise Alignments

Query, 229 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 229 a.a., ABC transporter for L-Arginine, permease component 1 (from data) from Pseudomonas simiae WCS417

 Score =  166 bits (420), Expect = 3e-46
 Identities = 77/222 (34%), Positives = 141/222 (63%), Gaps = 5/222 (2%)

Query: 2   VLTGYSLSLVQASWMTLQIALASLLVGLLLALVFAGGEMAKLKLIKWPTTLLVTVIRGLP 61
           +L GY   ++  +W+TLQ+AL+S+ + ++L L+     ++ ++ + W   L  TVIRG+P
Sbjct: 1   MLKGYGAVILDGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWLAWLGDLYSTVIRGIP 60

Query: 62  ELLVVLFIYFGSTQVLFFIT-----GEFIEISPFISGVIALSLIFASYASQTLRGALKAV 116
           +L+++L I++G   +L  +       ++I+++P  +G+  L  IF +Y S+T RGA  A+
Sbjct: 61  DLVLILLIFYGGQDLLNRVAPMLGYDDYIDLNPLAAGIGTLGFIFGAYLSETFRGAFMAI 120

Query: 117 GRGQREAASALGIPPSHAFIRIVLPQAVRHALPGLMNQWLVLLKDTALVSLIGVTDLLKQ 176
            +GQ EA  A G+     F R+++PQ +R A+PG  N WLVL K TAL+S++G+ D++ +
Sbjct: 121 PKGQAEAGLAYGMSSFQVFFRVMVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFK 180

Query: 177 AQLTSAATHEAFTWYATAAVVYLVITLITQRVVKVIDNKFSI 218
           A+  + AT E FT++   A +YLVIT ++   ++ ++ ++S+
Sbjct: 181 AKQAADATREPFTFFLAVAAMYLVITSVSLLALRHLEKRYSV 222