Pairwise Alignments

Query, 229 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 222 a.a., amino acid ABC transporter permease from Pseudomonas simiae WCS417

 Score =  130 bits (326), Expect = 3e-35
 Identities = 67/194 (34%), Positives = 121/194 (62%), Gaps = 7/194 (3%)

Query: 10  LVQASWMTLQIALASLLVGLLLALVFAGGEMAKLKLIKWPTTLLVTVIRGLPELLVVLFI 69
           L+Q +W+T+QI + S L+   L LV A  +++ ++ + W  + ++ VIRGLP ++ + +I
Sbjct: 17  LLQGAWVTIQITVLSFLLSSALGLVLALIKLSPIRALSWTASTIINVIRGLPIIVQLFYI 76

Query: 70  YFGSTQVLFFITGEFIEISPFISGVIALSLIFASYASQTLRGALKAVGRGQREAASALGI 129
           YF        +    + ++ F +GVI + + +++Y ++  R  + AV +GQREAA ALG+
Sbjct: 77  YF-------VLPDMGVHLTAFYAGVIGMGIAYSAYQAENFRTGIIAVEQGQREAAEALGM 129

Query: 130 PPSHAFIRIVLPQAVRHALPGLMNQWLVLLKDTALVSLIGVTDLLKQAQLTSAATHEAFT 189
             +    R++LPQA R ALP   N  +++LKD++LVS I V ++ +Q QL +++T +  T
Sbjct: 130 RSALMMRRVILPQAFRIALPPYGNTLVMMLKDSSLVSTITVAEMTRQGQLIASSTFQNMT 189

Query: 190 WYATAAVVYLVITL 203
            Y   A++YL+++L
Sbjct: 190 VYTLVALLYLLMSL 203