Pairwise Alignments

Query, 229 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 221 a.a., amino acid ABC transporter permease from Pseudomonas simiae WCS417

 Score =  135 bits (340), Expect = 6e-37
 Identities = 75/206 (36%), Positives = 123/206 (59%), Gaps = 7/206 (3%)

Query: 10  LVQASWMTLQIALASLLVGLLLALVFAGGEMAKLKLIKWPTTLLVTVIRGLPELLVVLFI 69
           L++ ++ T+ ++L  +  GLLL    A   +++ KL+ W   + V+  RG P L+ +  I
Sbjct: 15  LLKGAYYTVILSLGGMFFGLLLGFGLALMRLSRFKLVSWLARVYVSFFRGTPLLVQLFLI 74

Query: 70  YFGSTQVLFFITGEFIEISPFISGVIALSLIFASYASQTLRGALKAVGRGQREAASALGI 129
           Y+G  QV        IE+ P  + +I  SL  A+YA + LR A+ ++ RGQ EAA+++G+
Sbjct: 75  YYGLPQV-------GIELDPIPAAMIGFSLNMAAYACEILRAAIGSIERGQWEAAASIGM 127

Query: 130 PPSHAFIRIVLPQAVRHALPGLMNQWLVLLKDTALVSLIGVTDLLKQAQLTSAATHEAFT 189
             +    R +LPQA+R ALP L N ++ L+KDTAL + I V +L +QAQL SA T E FT
Sbjct: 128 TRAQTLRRAILPQAMRTALPPLGNSFISLVKDTALAATIQVPELFRQAQLVSARTFEIFT 187

Query: 190 WYATAAVVYLVITLITQRVVKVIDNK 215
            Y +AA++Y ++  I   +   ++++
Sbjct: 188 MYLSAALIYWILASILAHLQNRLEDR 213