Pairwise Alignments

Query, 229 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 246 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  172 bits (437), Expect = 4e-48
 Identities = 89/241 (36%), Positives = 153/241 (63%), Gaps = 26/241 (10%)

Query: 3   LTGYSLSLVQASWMTLQIALASLLVGLLLALVFAGGEMAKLKLIKWPTTLLVTVIRGLPE 62
           L GY  S+++ + +T+++A+ SLL+ +LL ++ A  +MA  +  +   TL  T+IRG+P+
Sbjct: 4   LQGYEASILKGALLTIEVAVLSLLLAMLLGMLGALAKMAPYRWARAIATLYTTIIRGIPD 63

Query: 63  LLVVLFIYFGSTQVLF---------FIT----------------GEFIEISPFISGVIAL 97
           L++++ I+FG  Q+L          FI                  ++++ISPF++GV+ +
Sbjct: 64  LVLMMLIFFGG-QILLNNGLSWFNEFINQWLTARDPNHEWVAYLPDYVDISPFVAGVLTI 122

Query: 98  SLIFASYASQTLRGALKAVGRGQREAASALGIPPSHAFIRIVLPQAVRHALPGLMNQWLV 157
             IF +Y ++T RGA+ AV +G+ EAA A G+  + +F RI+LPQ +RHA+PG  N WLV
Sbjct: 123 GFIFGAYMAETFRGAILAVDKGELEAAKAYGMSAAMSFRRILLPQMIRHAIPGFGNNWLV 182

Query: 158 LLKDTALVSLIGVTDLLKQAQLTSAATHEAFTWYATAAVVYLVITLITQRVVKVIDNKFS 217
           LLK TALVS+IG+ D+++ + L + +T   FT+Y   A+++L  T ++  ++K+++ KFS
Sbjct: 183 LLKTTALVSIIGLEDMVRISSLAAGSTKMPFTFYMAVAIIFLFFTSVSTGLLKLLERKFS 242

Query: 218 I 218
           I
Sbjct: 243 I 243