Pairwise Alignments

Query, 229 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 230 a.a., Amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  159 bits (402), Expect = 4e-44
 Identities = 86/207 (41%), Positives = 137/207 (66%), Gaps = 6/207 (2%)

Query: 3   LTGYSLSLVQASWMTLQIALASLLVGLLLALVFAGGEMAKLKLIKWPTTLLVTVIRGLPE 62
           L G+  +++  + MT+++AL +LL+GL+L L+ A  + +  K ++W      T++RG+PE
Sbjct: 5   LHGFGPAMMAGTLMTVKLALCALLLGLVLGLLGALAKTSPFKPLQWLGGFYSTLVRGVPE 64

Query: 63  LLVVLFIYFGSTQVLFFITGEFI-----EISPFISGVIALSLIFASYASQTLRGALKAVG 117
           LL VL IYFG+  ++  + GE +     E+S F +GVIAL L F +YA++  RGA+ A+ 
Sbjct: 65  LLWVLLIYFGTVGLMNSL-GEALNMPGLELSAFAAGVIALGLCFGAYATEVFRGAILAIP 123

Query: 118 RGQREAASALGIPPSHAFIRIVLPQAVRHALPGLMNQWLVLLKDTALVSLIGVTDLLKQA 177
           +G REA  ALG+       RI+LPQ  R ALPGL N +++L+KDTALVS+IG+ ++++ +
Sbjct: 124 KGHREAGLALGLSKGRILSRIILPQMWRIALPGLGNLFMILMKDTALVSVIGLEEIMRHS 183

Query: 178 QLTSAATHEAFTWYATAAVVYLVITLI 204
           Q+    T E FT+Y  AA +YL +T++
Sbjct: 184 QIGVTVTKEPFTFYMVAACIYLGLTVL 210