Pairwise Alignments

Query, 229 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 222 a.a., predicted transporter subunit: membrane component of ABC superfamily (NCBI) from Escherichia coli BW25113

 Score =  134 bits (337), Expect = 1e-36
 Identities = 71/210 (33%), Positives = 123/210 (58%), Gaps = 7/210 (3%)

Query: 10  LVQASWMTLQIALASLLVGLLLALVFAGGEMAKLKLIKWPTTLLVTVIRGLPELLVVLFI 69
           L++ +  TLQ+++  +  GLLL  + A   ++ +  ++W     +++ RG P +  +  I
Sbjct: 15  LLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYISIFRGTPLIAQLFMI 74

Query: 70  YFGSTQVLFFITGEFIEISPFISGVIALSLIFASYASQTLRGALKAVGRGQREAASALGI 129
           Y+G  Q         IE+ P  S +I LSL  A+YA++TLR A+ ++ +GQ EAA+++G+
Sbjct: 75  YYGLPQF-------GIELDPIPSAMIGLSLNTAAYAAETLRAAISSIDKGQWEAAASIGM 127

Query: 130 PPSHAFIRIVLPQAVRHALPGLMNQWLVLLKDTALVSLIGVTDLLKQAQLTSAATHEAFT 189
            P     R +LPQA R ALP L N ++ L+KDT+L + I V +L +QAQL ++ T E FT
Sbjct: 128 TPWQTMRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFT 187

Query: 190 WYATAAVVYLVITLITQRVVKVIDNKFSIQ 219
            Y  A+++Y ++  +   +    +N+ + Q
Sbjct: 188 MYLAASLIYWIMATVLSTLQNHFENQLNRQ 217