Pairwise Alignments

Query, 229 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 222 a.a., amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family from Enterobacter asburiae PDN3

 Score =  134 bits (338), Expect = 1e-36
 Identities = 73/210 (34%), Positives = 122/210 (58%), Gaps = 7/210 (3%)

Query: 10  LVQASWMTLQIALASLLVGLLLALVFAGGEMAKLKLIKWPTTLLVTVIRGLPELLVVLFI 69
           L++ +  TLQ+++  +  GL+L  V A   M+ +  ++W     ++V RG P +  +  I
Sbjct: 15  LLKGAVFTLQLSIGGMFFGLVLGFVLALMRMSPVLPVRWLARFYISVFRGTPLIAQLFMI 74

Query: 70  YFGSTQVLFFITGEFIEISPFISGVIALSLIFASYASQTLRGALKAVGRGQREAASALGI 129
           Y+G  Q         IE+ P  + +I LSL  A+Y S+TLR A+ ++ +GQ EAA+++G+
Sbjct: 75  YYGLPQF-------GIELDPIPAAMIGLSLNTAAYTSETLRAAISSIDKGQWEAAASIGM 127

Query: 130 PPSHAFIRIVLPQAVRHALPGLMNQWLVLLKDTALVSLIGVTDLLKQAQLTSAATHEAFT 189
            P     R +LPQA R ALP L N ++ L+KDT+L + I V +L +QAQL ++ T E FT
Sbjct: 128 TPWQTLRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFT 187

Query: 190 WYATAAVVYLVITLITQRVVKVIDNKFSIQ 219
            Y  A+++Y V+  +   +    +N+ + Q
Sbjct: 188 MYLAASLIYWVMATVLSALQNYFENQLNRQ 217