Pairwise Alignments

Query, 229 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 228 a.a., amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family from Enterobacter asburiae PDN3

 Score =  154 bits (390), Expect = 1e-42
 Identities = 80/221 (36%), Positives = 139/221 (62%), Gaps = 4/221 (1%)

Query: 2   VLTGYSLSLVQASWMTLQIALASLLVGLLLALVFAGGEMAKLKLIKWPTTLLVTVIRGLP 61
           +L G+S  ++Q + +TL++A++S+++ +L+ L  AG +++  K +        T+IRG+P
Sbjct: 1   MLYGFSGVILQGALVTLELAISSVVLAVLIGLAGAGAKLSANKPLALIFEGYTTLIRGVP 60

Query: 62  ELLVVLFIYFGSTQVLFFITGEF----IEISPFISGVIALSLIFASYASQTLRGALKAVG 117
           +L+++L I++G    L  +T       I+I P ++G+I L  I+ +Y ++T RGA  AV 
Sbjct: 61  DLVLMLLIFYGLQIALNSVTDAMGMGQIDIDPMVAGIITLGFIYGAYFTETFRGAYMAVP 120

Query: 118 RGQREAASALGIPPSHAFIRIVLPQAVRHALPGLMNQWLVLLKDTALVSLIGVTDLLKQA 177
           +G  EAA+A G   S  F RI+ P  +R+ALPG+ N W V+LK TALVSL+G+ D++K  
Sbjct: 121 KGHIEAATAFGFTSSQTFRRIMFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVKAT 180

Query: 178 QLTSAATHEAFTWYATAAVVYLVITLITQRVVKVIDNKFSI 218
           QL   +T E F +     V+YLV T ++  V+ +++ ++S+
Sbjct: 181 QLAGKSTWEPFYFAVVCGVIYLVFTTVSNGVLLLLERRYSV 221