Pairwise Alignments

Query, 229 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 240 a.a., ABC transporter permease subunit from Dickeya dianthicola ME23

 Score =  147 bits (371), Expect = 2e-40
 Identities = 80/218 (36%), Positives = 127/218 (58%), Gaps = 5/218 (2%)

Query: 5   GYSLSLVQASWMTLQIALASLLVGLLLALVFAGGEMAKLKLIKWPTTLLVTVIRGLPELL 64
           G+   L  A+  TL + +A+LL+G L+    A  +++  +L +        V RG+PELL
Sbjct: 11  GWGGLLAMAALTTLCLTMAALLIGALVGAAVAAAKLSTRRLWRVAGESYSVVFRGIPELL 70

Query: 65  VVLFIYFGSTQVL-----FFITGEFIEISPFISGVIALSLIFASYASQTLRGALKAVGRG 119
           ++   YFG + VL     +F    FIE+ PF+ G +A+ LI ASY  +  R A  AV  G
Sbjct: 71  IIYLFYFGGSGVLTQVGRWFGADGFIELPPFLIGALAIGLISASYQGEVYRAARLAVNSG 130

Query: 120 QREAASALGIPPSHAFIRIVLPQAVRHALPGLMNQWLVLLKDTALVSLIGVTDLLKQAQL 179
           + EAA A+G+P      RI+LPQ +R ALPGL N W + LKD+ALVS+ G+ +L++ +Q+
Sbjct: 131 ELEAARAMGMPRWRIGWRILLPQVMRFALPGLSNVWQMSLKDSALVSVTGIIELMRASQM 190

Query: 180 TSAATHEAFTWYATAAVVYLVITLITQRVVKVIDNKFS 217
            + +T + F +Y T A +YL++T+ +      ++   S
Sbjct: 191 AAGSTRDYFLFYLTGAALYLILTVFSNTAFARLERTLS 228