Pairwise Alignments

Query, 229 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 229 a.a., ABC transporter permease subunit from Dickeya dianthicola ME23

 Score =  159 bits (402), Expect = 4e-44
 Identities = 85/217 (39%), Positives = 133/217 (61%), Gaps = 4/217 (1%)

Query: 5   GYSLSLVQASWMTLQIALASLLVGLLLALVFAGGEMAKLKLIKWPTTLLVTVIRGLPELL 64
           GYS  ++  + MTLQ+AL SL++ LL+ LV A  +++  +L+    +   T+IRG+P+L+
Sbjct: 4   GYSELIMDGARMTLQLALCSLVLSLLIGLVGAAAKLSSSRLLSGCFSGYTTLIRGVPDLV 63

Query: 65  VVLFIYFGSTQVLFFITGEF----IEISPFISGVIALSLIFASYASQTLRGALKAVGRGQ 120
           ++L I++G    L  +T       I+I P  +G+I L  I+ +Y ++T RGA  AV RGQ
Sbjct: 64  LMLLIFYGLQMALNSLTEALSLDQIDIDPLAAGIITLGFIYGAYFTETFRGAYLAVPRGQ 123

Query: 121 REAASALGIPPSHAFIRIVLPQAVRHALPGLMNQWLVLLKDTALVSLIGVTDLLKQAQLT 180
            EAA A G  P   F RI+ P  +R ALPG+ N W V+LK TALVSL+G++D++K  QL 
Sbjct: 124 IEAAVAFGFTPMKVFRRIMFPSMMRFALPGIGNNWQVILKATALVSLLGLSDVIKATQLA 183

Query: 181 SAATHEAFTWYATAAVVYLVITLITQRVVKVIDNKFS 217
              TH  F +   A  +YL+ T ++  V+  ++ ++S
Sbjct: 184 GKGTHHPFFFAIVAGALYLIFTTLSNGVLWWLEKRYS 220