Pairwise Alignments

Query, 229 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 236 a.a., ABC transporter, membrane spanning protein (nopaline) from Agrobacterium fabrum C58

 Score =  138 bits (348), Expect = 8e-38
 Identities = 69/209 (33%), Positives = 128/209 (61%), Gaps = 6/209 (2%)

Query: 5   GYSLSLVQASWMTLQIALASLLVGLLLALVFAGGEMAKLKLIKWPTTLLVTVIRGLPELL 64
           G+   L + + MT+ +A  S   G++   +FA  ++++   ++    +  TV+RG+PELL
Sbjct: 12  GWGDELARGAMMTVVVAACSYFFGIIFGSLFAAAKLSRFWSLRLLGDVYTTVVRGVPELL 71

Query: 65  VVLFIYFGSTQVLFFITGE------FIEISPFISGVIALSLIFASYASQTLRGALKAVGR 118
           ++  ++FG   +L  I         +IE   F+ GV+ +S+   +YA++ +R A+ AV  
Sbjct: 72  IIFLVFFGGGTLLRTIANGLFGYEGYIEPPIFVIGVLCISVSAGAYATEVIRAAVLAVPP 131

Query: 119 GQREAASALGIPPSHAFIRIVLPQAVRHALPGLMNQWLVLLKDTALVSLIGVTDLLKQAQ 178
           GQ EAA ++G+ P     R+++PQA R ALPGL N W   LKDT+L+S++G+ ++++ A 
Sbjct: 132 GQIEAAKSIGMGPWLRLRRVLIPQAARFALPGLGNVWQFTLKDTSLISVVGLVEIMRTAA 191

Query: 179 LTSAATHEAFTWYATAAVVYLVITLITQR 207
           + + +T + FT+Y TA V++L+++ ++ R
Sbjct: 192 MGAGSTKQPFTFYITAFVIFLLLSSVSNR 220