Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., DNA-binding transcriptional regulator OxyR from Vibrio cholerae E7946 ATCC 55056

 Score = 71.6 bits (174), Expect = 2e-17
 Identities = 76/299 (25%), Positives = 127/299 (42%), Gaps = 27/299 (9%)

Query: 13  LVDTGHFTKTAEKLFMTQPGVSQHIRKLEEACQHPLIHRINKSFELTDQGRMVYEYATQL 72
           L D  HF K AE  F++QP +S  IRKLE+     L+ R ++    T+ G  + + A ++
Sbjct: 12  LADHKHFRKAAEACFVSQPTLSGQIRKLEDEIGTTLLERSSRRVLFTEAGLQLVDQAKKI 71

Query: 73  AKNERRLLEQIH-ETEPFAGRYRIACSGSLSLVIYPPLL-ALQQLHPKLCIELEAAPNHT 130
               +   +  + +T    G   I    +L   + P ++  L++  P+L + L  A  + 
Sbjct: 72  LSEVKTFKDMANQQTGAMTGPLHIGFIPTLGPYLLPKIIPTLKERFPELELYLHEAQTNQ 131

Query: 131 ILKAIKEGDVDVGIVTSQPSQGVFESEVLGEEPLYLVLPHDHP----TEPDQL---ADHL 183
           +++ ++EG +D  ++ S      F+   L  E L + +P DH      E D L      +
Sbjct: 132 LVRQLEEGKLDCLVLASVEETAPFKEIELYNEVLSIAVPCDHAWAARDEVDMLELKGKTV 191

Query: 184 LQLGLIGHPDIDHYFSLYLAKSTNLTLTVLNSESFPRSGYVNQIQQILLPVAKGLGFTVL 243
           L LG  GH   D       A          + E F        ++ +   VA G G T+L
Sbjct: 192 LALG-DGHCLRDQALGFCFAAGAK------DDERFK----ATSLETLRNMVAAGAGITLL 240

Query: 244 PKSAVENFPLREQISVFE--NPAPVTETLYLVKKRQRDLPQRFADVSQQLKEWVAHYTQ 300
           P+ A+     ++ +      NP P +  L L  +    L QRF    +QL E + H  Q
Sbjct: 241 PELALPEDKTKDGVCYLRAVNPIP-SRRLVLAYRPGSPLRQRF----EQLAEVIKHRLQ 294