Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

 Score = 79.0 bits (193), Expect = 1e-19
 Identities = 78/301 (25%), Positives = 131/301 (43%), Gaps = 57/301 (18%)

Query: 7   LQTFKTLVDTGHFTKTAEKLFMTQPGVSQHIRKLEEACQHPLIHRINKSFELTDQGRMVY 66
           L+ F T+     F++  E++ ++Q  VS  +++LE      L+ R  +   LTD G+   
Sbjct: 8   LKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ--- 64

Query: 67  EYATQLAKNERRLLEQIHET--------EPFAGRYRIACSGSLSLVIYPPLLA-LQQLHP 117
               QLA    RLL++++ T        +  +G+ R+A S ++S  + P  +A   + +P
Sbjct: 65  ----QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120

Query: 118 KLCIELEAAPNHTILKAIKEGDVDVGIVTSQPSQGVFESEVLGEEPLYLVLPHDHPTEPD 177
            +   L   P   ++++I++GDVD GIV      G  + E +  EP +L+   D      
Sbjct: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALA-- 178

Query: 178 QLADHLLQLGLIGHPDIDHYFSLYLAKSTNLTLTVLNSESFP-------RSG-YVNQIQQ 229
                           ++ Y      +   L L    S S P       R+G   N +Q+
Sbjct: 179 ----------------VEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQE 222

Query: 230 ILLP------VAKGLGFTVLPKSAV---ENFPLREQISVFENPAPVTE-TLYLVKKRQRD 279
           I  P      VA G+G ++LP  A+   E  PL     V +   PV E  L LV+++ R 
Sbjct: 223 IGHPATLFPMVAAGIGISILPALALPLPEGSPL-----VVKRITPVVERQLMLVRRKNRS 277

Query: 280 L 280
           L
Sbjct: 278 L 278