Pairwise Alignments

Query, 384 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 391 a.a., putative MFS-type transporter YcaD from Xanthobacter sp. DMC5

 Score = 99.0 bits (245), Expect = 2e-25
 Identities = 92/375 (24%), Positives = 156/375 (41%), Gaps = 13/375 (3%)

Query: 4   HSSAPNRIAVPVIALTLYAIAAGYLMSLVPLMLPHYQLESDLASWLA-SVFYAGLLAGAL 62
           H S    IA  + A+T+  +  G  +S +PL+    +       W+  +   AG+    +
Sbjct: 10  HMSRTASIAAAISAITV--VGVGISLS-IPLLALELESRGIANKWIGINTAVAGI--ATI 64

Query: 63  VAEPFV----NRLGHRKAFVWCLSLLQLSIVVMPLLPYASVWLLARLVAGIAVAGIFVVV 118
              PFV     ++G R   V  + L   S+V     P   +W   R   G A+  +F V 
Sbjct: 65  FTAPFVPLLVRKMGLRALLVGAIILAAASLVGFKAAPSFLMWFPLRFAFGAALCILFAVS 124

Query: 119 ESWL-LHGDEQGRAKRLGIYMVSLYGGTALGQMAIGQLGVAGAVPFIAITTLLLIASIVL 177
           E W+        R   +GIY  +L  G ALG   +  LG +G  P++A   +LL+ +I +
Sbjct: 125 EFWINALAPPNRRGLIMGIYATALSLGAALGPTILSVLGASGWAPYLAGAVVLLLGAIPI 184

Query: 178 MYVDSDQPSTQQASSLSLRQIFKLSKAAMIGCLVSGLTLGAIYGLMPVELANRGISHTDL 237
           +      P     S   +    + S +A++  LV G    A+   +P+     G+S T  
Sbjct: 185 LLARGITPRIHDDSHHGVLTFVRRSPSAVLAALVFGAIETAVMTFLPLYGLRLGLSETSA 244

Query: 238 GNLMALVILGGMAVQPLVPWLSKFLGRTLQMALFCLLGTA-AITLTVFDDSLLVLGVSLF 296
             L+   +LG +A Q  +  +S  + R + +    L G A A TL     S       +F
Sbjct: 245 ALLLTAAVLGNVAFQIPIGLISDKVDRRVLLFCCSLAGAAGAFTLPFVPVSSPWFLAMIF 304

Query: 297 ILGMATFALYPIAINLGCDKLDASYIVSATQVMLLSYSVGSVVGPVLADCFMQDRHGLMA 356
           +      +LY + +    ++   + + +A    ++ YSVG + GP LA   M D +    
Sbjct: 305 LATGVVGSLYTVGLAHLGERFHGADLAAANAAFVMLYSVGLIAGPPLAGAGM-DLYNPYG 363

Query: 357 YLFAILLATCLYMLI 371
           + F I     +Y  I
Sbjct: 364 FAFVISTMLAVYAAI 378