Pairwise Alignments

Query, 384 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 454 a.a., putative Membrane protein from Pseudomonas putida KT2440

 Score =  173 bits (439), Expect = 8e-48
 Identities = 110/364 (30%), Positives = 191/364 (52%), Gaps = 10/364 (2%)

Query: 14  PVIALTLYAIAAGYLMSLVPLMLPHYQLESDLASWLASVFYAGLLAGALVAEPFVNRLGH 73
           P++ L + A+  G++ SL  L L      +     ++S ++ GL  GA+  +  + R+GH
Sbjct: 34  PLLGLFIIALGNGFMSSLTTLRLGAAGESATTIGIVSSTYFIGLTLGAIFNDRLILRIGH 93

Query: 74  RKAFVWCLSLLQLSIVVMPLLPYASVWLLARLVAGIAVAGIFVVVESWLL-HGDEQGRAK 132
            +A+    SL+ ++I++  L    + W + RL+ G A  G+F+V+ESWLL  GD + R +
Sbjct: 94  IRAYTSFASLIAVTILLQGLFYEVTWWSVLRLINGWAAVGVFLVIESWLLLAGDAKIRGR 153

Query: 133 RLGIYMVSLYGGTALGQMAIGQLGVAG-AVPFIAITTLLLIASIVLMYVDSDQPSTQQAS 191
            L +YM++ YG   + Q  +G++   G   PF+    L  ++ + ++ +    P   Q  
Sbjct: 154 LLALYMIAFYGAGVIAQAGLGEITQLGDTAPFMLAGVLAALSVLPIVILPRVSPLLDQVE 213

Query: 192 SLSLRQIFKLSKAAMIGCLVSGLTLGAIYGLMPVELANRGISHTDLGNLMALVILGGMAV 251
            L  RQ+  ++ + ++GC  SG+ +  IY L+P+ L   G+   ++GN+MA VILG M +
Sbjct: 214 PLKPRQLLGVAPSGLVGCFGSGVAIAGIYALLPLYLQRIGLEVGEVGNMMAWVILGAMLL 273

Query: 252 Q-PLVPWLSK--FLGRTLQMALFCLLGTAAITLTVFDDSLLVLGVSLFILGMATFALYPI 308
           Q P+  W  +   L   L +A  C++  + +T+ +  DS L L   LF+LG   F LYP+
Sbjct: 274 QYPVGRWSDRKDRLDVLLALAALCVV-LSLVTVFLPSDSFL-LPAMLFLLGGGVFTLYPV 331

Query: 309 AINLGCDKLDASYIVSATQVMLLSYSVGSVVGPVLADCFMQD--RHGLM-AYLFAILLAT 365
           A++   D+  +  +V   Q +LL  S+GS + PV     M +    GL  A+    L   
Sbjct: 332 AVSHAADRAPSDALVPMIQGLLLINSLGSAMAPVAISPMMTEFGEAGLFWAFAVVNLAMV 391

Query: 366 CLYM 369
           C +M
Sbjct: 392 CFFM 395