Pairwise Alignments

Query, 384 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 382 a.a., Arabinose efflux permease from Enterobacter asburiae PDN3

 Score =  163 bits (412), Expect = 9e-45
 Identities = 106/364 (29%), Positives = 188/364 (51%), Gaps = 13/364 (3%)

Query: 18  LTLYAIAAGYLMSLVPLMLPHYQLESDLASWLASVFYAGLLAGALVAEPFVNRLGHRKAF 77
           L L  +A   L +LVPL L H  L +     ++S F+ G L G L+    + R G  +++
Sbjct: 15  LLLLTLAIAVLNTLVPLWLAHENLPTWQVGMVSSSFFTGNLLGTLLTGSLIKRFGFNRSY 74

Query: 78  VWCLSLLQLSIVVMPLLPYASVWLLARLVAGIAVAGIFVVVESWLL-HGDEQGRAKRLGI 136
                +       + L+     W+  R +AG+  A I+VVVES L+  G  + R + L  
Sbjct: 75  YLASLIFAAGCAGLGLMVGFWSWMAWRFIAGVGCAMIWVVVESALMCSGTSRNRGRLLAA 134

Query: 137 YMVSLYGGTALGQMAIGQL--GVAGAVPFIAITTLLLIASIVLMYVDSDQPSTQQASSLS 194
           YM+  Y GT LGQ+ + +L   +   +P++    L  I  ++   + +     Q+A+ + 
Sbjct: 135 YMMVYYVGTVLGQLMVSKLPTDLMSVLPWVTGMVLAAILPLLFTRIVNQNSEHQKATHVW 194

Query: 195 LRQIFKLSKAAMIGCLVSGLTLGAIYGLMPVELANRGISHTDLGNLMALVILGGMAVQPL 254
                + ++  + GC++SG+ LG++YGLMP+ L ++G+S + +G  MA+++  G+  Q  
Sbjct: 195 PMLRLRQARLGVNGCIISGIVLGSLYGLMPLYLNHQGVSDSGIGFWMAVMVSAGIVGQWP 254

Query: 255 VPWLSKFLGRTLQMAL---FCLLGTAAITLTVFDDSLLVLGVSLFILGMATFALYPIAIN 311
           +  L+   GR L + +     ++G  A+       S   +  +LFILG A F LYP+A+ 
Sbjct: 255 IGRLADRFGRLLVLRVQVFVVIMGCLAML------SNAAMAPALFILGAAGFTLYPVAMA 308

Query: 312 LGCDKLDASYIVSATQVMLLSYSVGSVVGPVLADCFMQD-RHGLMAYLFAILLATCLYML 370
             C+K++   +V+  Q +LLSY++GS++GP      MQ+    L+  + A +    L ML
Sbjct: 309 WACEKVEHHQLVAMNQALLLSYTIGSLLGPTFTAMLMQNYSDNLLFIMIASVSFIYLLML 368

Query: 371 IKSV 374
           ++ V
Sbjct: 369 LRKV 372