Pairwise Alignments

Query, 384 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 424 a.a., putative MFS-type transporter YcaD from Azospirillum sp. SherDot2

 Score =  147 bits (371), Expect = 5e-40
 Identities = 107/357 (29%), Positives = 180/357 (50%), Gaps = 11/357 (3%)

Query: 15  VIALTLYAIAAGYLMSLVPLMLPHYQLESDLASWLASVFYAGLLAGALVAEPFVNRLGHR 74
           ++A+ L     G L ++V + L        L   L + +Y G+  G+  A   V ++GH 
Sbjct: 11  LLAVFLMMGGTGALTTIVSVRLDAAGAPPILLGALTAAYYLGVTVGSTQAFRLVGQVGHI 70

Query: 75  KAFVWCLSLLQLSIVVMPLLPYASVWLLARLVAGIAVAGIFVVVESWLLHGDEQG-RAKR 133
           +AF    ++L  + +   L    + W+  RLV G  +AG+FV +ESWL        R + 
Sbjct: 71  RAFSASATVLVAATLGHTLGSDPATWIALRLVEGCCMAGLFVCIESWLNQSATSATRGQI 130

Query: 134 LGIYMVSLYGGTALGQMAIGQLGVAGAVPFIAITTLLLIASIVLMYVDSDQPSTQQASSL 193
           L +YM++LYG    GQ  +      G   F+ ++ L+ +A + +    +  P  Q+  S+
Sbjct: 131 LALYMIALYGAQGAGQYLMVIDDPHGFKQFVIVSILVSLALVPVALSRTAPPLLQKLESV 190

Query: 194 SLRQIFKLSKAAMIGCLVSGLTLGAIYGLMPVELANRGISHTDLGNLMALVILGGMAVQP 253
            +  +++ S     G ++SGL +GA YGL PV + + G         ++  I+GGM +Q 
Sbjct: 191 RIGHLYRASPLGFAGTVISGLVVGAFYGLGPVYVRHLGYDLGQSATFISAAIIGGMLLQW 250

Query: 254 LVPWLSKFLGRTLQM-ALFCLLGTAAITLTVFDDS---LLVLGVSLFILGMATFALYPIA 309
               LS  + R L +  LF  L   +I +T+  +S    L+ G+SLF  G   FA+YPI 
Sbjct: 251 PFGKLSDLIDRRLVLVGLFAALAVISIGMTMLPESGFGPLLAGISLF--GGIIFAIYPIC 308

Query: 310 INLGCDKLDASYIVSATQVMLLSYSVGSVVGPVLADCFMQ--DRHGLMAYLFAILLA 364
           ++   D L  + +V A+  M+L +S+G++ GP LA   M   ++ GL  +LFA L+A
Sbjct: 309 VSHTNDFLTPAEMVPASGGMVLGFSIGAIAGPFLASLVMAVFEQDGL--FLFAALVA 363



 Score = 25.8 bits (55), Expect = 0.002
 Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 17/97 (17%)

Query: 251 VQPLVPWLSKFLGRTLQMALFCLLGTAAITLTVFDDSLLVLGVSLFILGMATFALYPIAI 310
           +QP+VP L         +A+F ++G      T+    L   G    +LG  T A Y + +
Sbjct: 4   IQPIVPLL---------LAVFLMMGGTGALTTIVSVRLDAAGAPPILLGALTAAYY-LGV 53

Query: 311 NLGCDKL-----DASYI--VSATQVMLLSYSVGSVVG 340
            +G  +         +I   SA+  +L++ ++G  +G
Sbjct: 54  TVGSTQAFRLVGQVGHIRAFSASATVLVAATLGHTLG 90