Pairwise Alignments

Query, 384 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 429 a.a., MFS permease from Agrobacterium fabrum C58

 Score =  124 bits (312), Expect = 4e-33
 Identities = 88/332 (26%), Positives = 154/332 (46%), Gaps = 11/332 (3%)

Query: 49  LASVFYAGLLAGALVAEPFVNRLGHRKAFVWCLSLLQLSIVVMPLLPYASVWLLARLVAG 108
           +++ +  G   G +     + R+GH + F    ++   + + MPL+ +   W+L R V G
Sbjct: 45  ISAAYSIGFALGCISVTQLMRRIGHIRTFATMAAVASAASIAMPLVLHPLFWMLMRFVIG 104

Query: 109 IAVAGIFVVVESWL-LHGDEQGRAKRLGIYMVSLYGGTALGQMAIGQLGVAGAVPFIAIT 167
           IAVA +F  +ESW+        RA+ L IY     G   L Q  I   G+ G V F  I 
Sbjct: 105 IAVACLFAAIESWINAQVTNSNRARTLSIYRFVDLGSVTLAQYIIPIAGIDGPVVFSLIA 164

Query: 168 TLLLIASIVLMYVDSDQPSTQQASSLSLRQIFKLSKAAMIGCLVSGLTLGAIYGLMPVEL 227
             L ++ + +   D   P+  +    +L  ++++S  A++GC+  GL++ A   + P+  
Sbjct: 165 MALTLSLVPISIADKSNPTPPKQIPFNLFAVWRISPLAVVGCVAVGLSMAAFRNMGPIYA 224

Query: 228 ANRGISHTDLGNLMALVILGGMAVQ-PLVPWLSKFLGRTLQMALFCLLGTAAITLTVF-- 284
              G+S T +   M+  I+GG+ +Q PL  +  ++  R + +A         + L  F  
Sbjct: 225 EQIGMSVTAIATFMSAGIIGGVVLQYPLGVYSDRYDRRIIILATTAGSVIVGLFLAFFAG 284

Query: 285 -DDSLLVLGVSLFILGMATFALYPIAINLGCDKLDASYIVSATQVMLLSYSVGSVVGPVL 343
            D+   ++GV  F+ G     LY ++   G D          +  +L  +SVG+ VGP+L
Sbjct: 285 TDEWSNIIGV--FVFGAFALPLYSLSSAHGNDHAREGEHAMMSAGLLFFWSVGATVGPLL 342

Query: 344 ADCFMQDRHG---LMAYLFAILLATCLYMLIK 372
           A   + D+ G   L +Y  AI +    Y L +
Sbjct: 343 ASLLI-DQFGPKALFSYTAAIQIVFIAYTLYR 373



 Score = 29.3 bits (64), Expect = 2e-04
 Identities = 37/159 (23%), Positives = 60/159 (37%), Gaps = 6/159 (3%)

Query: 189 QASSLSLRQIFKLSKAAMIGCLVSGLTLGAIYGLMPVELANRGISHTDLGNLMALVILGG 248
           Q + ++LR + +   A+ IG + +  ++G   G + V    R I H      MA V    
Sbjct: 24  QGTYIALRGLSEGFSASTIGLISAAYSIGFALGCISVTQLMRRIGHIRTFATMAAVASAA 83

Query: 249 MAVQPLV--PWLSKFLGRTLQMALFCLLGTAAITL---TVFDDSLLVLGVSLFI-LGMAT 302
               PLV  P     +   + +A+ CL       +       +    L +  F+ LG  T
Sbjct: 84  SIAMPLVLHPLFWMLMRFVIGIAVACLFAAIESWINAQVTNSNRARTLSIYRFVDLGSVT 143

Query: 303 FALYPIAINLGCDKLDASYIVSATQVMLLSYSVGSVVGP 341
            A Y I I      +  S I  A  + L+  S+     P
Sbjct: 144 LAQYIIPIAGIDGPVVFSLIAMALTLSLVPISIADKSNP 182