Pairwise Alignments

Query, 284 a.a., aquaporin family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 233 a.a., porin from Pseudomonas simiae WCS417

 Score = 84.3 bits (207), Expect = 2e-21
 Identities = 73/246 (29%), Positives = 110/246 (44%), Gaps = 24/246 (9%)

Query: 8   TLLGQCIAEFIGTGLLIFFGVG-CVAALVLAGAQFGQWEISIVWGFGVSIAIYCTAGVSG 66
           +L  + I E +GT  L+  G G  V A        G   +S+ +G  V    +    +SG
Sbjct: 2   SLFKRSITEGLGTFWLVLGGCGSAVLAAAFPAVGIGLLGVSLAFGLTVLTMAFAIGHISG 61

Query: 67  AHINPAVTIALAAFHGFDKAKVLPYIVSQVAGAFCAAALVYSLYSNLFTDYEIAHNFVRS 126
            H+NPAV++ L     F   ++  YIV+QV G   AAAL+Y + S     +E+A      
Sbjct: 62  CHLNPAVSVGLVVGGRFPARELPAYIVAQVVGGTIAAALLYFIASGK-PGFELA------ 114

Query: 127 SQEALATAGIFSTYPHASLSFMGAMAVEFTITAVLMFAILALGDENNGAHRNAMNPLLIG 186
               LA+ G +  +     S +     E  +TA  MF ++ LG  +  A    + P+ IG
Sbjct: 115 --SGLASNG-YGEHSPGGYSMVAGFVCELVMTA--MFVVIILGATDRRA-PPGLAPVAIG 168

Query: 187 ILIAVIGGSLGPLTGFAMNPARDFGPKLFAYFAGWDYALTGAKEIPYFIVPIVAPILGAC 246
           + + +I     P+T  ++NPAR  GP L     GW         I    +  +APILGA 
Sbjct: 169 LALTLIHLISIPVTNTSVNPARSTGPALIV--GGW--------AIQQLWMFWLAPILGAV 218

Query: 247 FGAWAY 252
            G   Y
Sbjct: 219 IGGVTY 224