Pairwise Alignments

Query, 284 a.a., aquaporin family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 251 a.a., porin from Pseudomonas simiae WCS417

 Score = 92.4 bits (228), Expect = 9e-24
 Identities = 78/232 (33%), Positives = 114/232 (49%), Gaps = 21/232 (9%)

Query: 15  AEFIGTGLLIFFGVG-CVAALVLAGAQFGQWEISIVWGFGVSIAIYCTAGVSGAHINPAV 73
           AEFIGT  L F G G  + A        G   +S+ +G  V    Y   G+SG H NPAV
Sbjct: 7   AEFIGTFWLTFGGCGSAILAAAFPELGIGFVGVSLAFGLTVLTMAYAVGGISGGHFNPAV 66

Query: 74  TIALAAFHGFDKAKVLPYIVSQVAGAFCAAALVYSLYSNLFTDYEIAHNFVRSSQEALAT 133
           T+ L A       +VLPYI +QVAGA  A+A +Y L +N   D+ I   F  +    L +
Sbjct: 67  TLGLWAGRRVAAGEVLPYIAAQVAGAIGASAALY-LIANGQPDFAIG-GFAANGYGPL-S 123

Query: 134 AGIFSTYPHASLSFMGAMAVEFTITAVLMFAILALGDENNGAHRNAMNPLLIGILIAVIG 193
            G+F            A+  E   T   +F I+ +   ++GA      P+ IG+ + +I 
Sbjct: 124 PGLF--------DMKAALLAECIATFFFLFIIMRV--TSSGA-VPGFAPIAIGLALTLIH 172

Query: 194 GSLGPLTGFAMNPARDFGPKLFAYFAGWDYALTGAKEIPYFIVPIVAPILGA 245
             L P+T  ++NPAR  GP   A FAG +Y    A+   +++ P+V  ++GA
Sbjct: 173 LVLIPVTNTSVNPARSTGP---ALFAGGEYL---AQLWLFWLAPMVGGVMGA 218