Pairwise Alignments

Query, 386 a.a., conjugal transfer protein TraF from Vibrio cholerae E7946 ATCC 55056

Subject, 401 a.a., conjugal transfer protein TraF from Dickeya dianthicola ME23

 Score =  181 bits (458), Expect = 4e-50
 Identities = 119/397 (29%), Positives = 201/397 (50%), Gaps = 20/397 (5%)

Query: 8   TLAVVMAMA-FSSSAFASNLLMDARGAGMGNTGVSTADYLLAPYYNPALTAVYRKNDSFG 66
           T A++ A+A    +A A+    DAR   MG TGV+++ Y  A   NPAL   +  ND   
Sbjct: 7   THAIIAALATLPVAAMAAGTWSDARNDAMGGTGVASSHYGSAALVNPALLTKFNSNDHIS 66

Query: 67  ILLPSIGLRAEDKDESLKTIDDLQDSIEQFERA-GVGAATQENVDQLNRYLDQLADDKPL 125
           ++LPSIG    + D+     D +++S + +++A      T  +   L      ++  K  
Sbjct: 67  LILPSIGATVSNPDKIEDKFDSVKNSWDSYKQATAFNTNTTASAQNLKNAFQDISG-KGG 125

Query: 126 AVTAGIGIAVALPLDAVSLNFFTRGYAEVIAKANVAAK---------SGNSANEVKTRYE 176
           +  A    A+++P   +   F  + +    AKA V            +G +         
Sbjct: 126 SADAAFSTAISVPNTTLPFAFTAKAWGVASAKATVTDNDLAYLDSVIAGRTPTSADLNSL 185

Query: 177 SSDVDLTAFGYTEVGLAVGKQVVLGGQTVALGVTPKVQQLRTYQDNASVKSFDLDDYDKS 236
           +S  D      TE G++  K   L G+TV++G+TPK+QQ+  Y  N  + ++   D+  S
Sbjct: 186 TSRADGAGAIVTEYGISAAKSFALAGKTVSVGMTPKLQQVYLYNYNVGINNYSSSDFRNS 245

Query: 237 EVK--DNSFNLDMG-AVWLIDQYRVGIVAKDLFAKDIQTQNRNN---TYKLDTQIAVSGS 290
           E K  ++  N+D+G A+ L   + VG+V ++L A+ I ++  N    T+++  Q  V  +
Sbjct: 246 EFKSSESGGNIDVGFAMDLTPNWTVGLVGQNLVARSIDSKEVNGIKRTFEIRPQATVGTA 305

Query: 291 YVSDFFIAAVDLDLTKQRRFNGDNDDTQFMRFGVEGNAWGWAQLRAGYEVDLQNSLDNSV 350
           + +     A D+DLT    F+G+  + Q+   G E NAW WAQLRAGY  +L++S  + +
Sbjct: 306 WTNGTVTLATDVDLTPASGFSGEKKN-QYAGVGAELNAWNWAQLRAGYRANLKDSDRSLI 364

Query: 351 SVGLGVSPWDVVSLDLAGSY-AGDNQFGLSANLAFTF 386
           + G+G+SP+++V LDL G      N +G +A L+FTF
Sbjct: 365 TAGVGLSPFNLVHLDLTGMVGTSSNTYGAAAKLSFTF 401