Pairwise Alignments

Query, 386 a.a., conjugal transfer protein TraF from Vibrio cholerae E7946 ATCC 55056

Subject, 415 a.a., conjugal transfer protein TraF from Dickeya dianthicola ME23

 Score =  154 bits (390), Expect = 3e-42
 Identities = 120/409 (29%), Positives = 202/409 (49%), Gaps = 34/409 (8%)

Query: 10  AVVMAMAFSSS-AFASNLLMDARGAGMGNTGVSTADYLLAPYYNPALTAVYRKNDSFGIL 68
           A+ +A  FS +  FA+ +  DAR   MG TGV+++ Y  A   NPAL    + +D+  ++
Sbjct: 9   AITVAGLFSPAMTFAAGIGSDARNDAMGGTGVASSHYGSAALTNPALLTKAQASDNVSLI 68

Query: 69  LPSIGLRAEDKDESLKTIDDLQ---DSIEQFERAGVGA--------ATQENVDQLNRYLD 117
           LPS+G+   D D+     D ++   DSI+    +  G         A Q+ +        
Sbjct: 69  LPSVGVVVSDPDKVEDKFDRIKTSWDSIKDLLNSSSGITNPLLRRLALQQGISSFQSLRG 128

Query: 118 QL--ADDKPLAVTAGIGIAVALPLDAVSLNFFTRGYAEVIAKANVAAK------SGNSAN 169
           +L   ++      A     VA+P D +      +G+    A+A V  +      S  +  
Sbjct: 129 ELNSINNARAYGDAAASTVVAVPNDTLPFAVVVKGWGVANARAVVTDRDLAYLDSVAAGA 188

Query: 170 EVKTRYESSDVDLTAFG----YTEVGLAVGKQVVLGGQTVALGVTPKVQQLRTYQDNASV 225
            + T  + ++    A G     TE G+A+ K   + GQ V++G+TPK+Q++ TY   AS+
Sbjct: 189 AIPTAADLNNFTSRAEGAGALVTEYGVAMAKAFSIAGQPVSVGITPKLQRIDTYNYIASI 248

Query: 226 KSFDLDDYDKSEVKDNS--FNLDMG-AVWLIDQYRVGIVAKDLFAKDIQT---QNRNNTY 279
            ++   D+  SE K +S   NLD+G +  L  ++  G+VA++L  + I T   Q    T+
Sbjct: 249 NNYSTSDFRNSEFKKSSSGANLDLGFSTDLTSRWSAGLVAQNLIGRRIDTKEVQGIQRTF 308

Query: 280 KLDTQIAVSGSYVSDFFIAAVDLDLTKQRRFNGDNDDTQFMRFGVEGNAWGWAQLRAGYE 339
            L  Q+    ++ ++    A D+DLT    F+ +  + Q+   G E     WAQLR GY 
Sbjct: 309 HLRPQVTAGTAWSTETLTLATDIDLTPASGFDSEKKN-QYAGVGAEYRVLSWAQLRVGYR 367

Query: 340 VDLQNSLDNSVSVGLGVSPWDVVSLDLAGSYAGDNQ--FGLSANLAFTF 386
            ++++S  N V+ GLG+SP+  V LDL G    +++  +G +A L+FTF
Sbjct: 368 ANVRDSDKNLVTAGLGLSPFG-VHLDLTGMVGTESKHTYGAAAKLSFTF 415