Pairwise Alignments

Query, 364 a.a., autoinducer 2-binding periplasmic protein LuxP from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., ribose ABC transporter substrate-binding protein RbsB from Escherichia coli ECOR38

 Score = 60.1 bits (144), Expect = 7e-14
 Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 3/173 (1%)

Query: 175 YIGFDHEYGAQLLAQYYQAHAPK--KPYSVLYFSEGYISEARGDTFIQDMNAVHHFPLAS 232
           +I  D+  G ++   Y    A +  K   +   +    +  RG+ F Q + A H F + +
Sbjct: 123 HIASDNVLGGKIAGDYIAKKAGEGAKVIELQGIAGTSAARERGEGFQQAV-AAHKFNVLA 181

Query: 233 SYYTKATEQSGYEATLNIVKNNPEIGFIYACATDVALGAAQALKELNRQDILVNGWGGGS 292
           S         G     N++  +P++  ++A   ++ALGA +AL+   + D++V G+ G  
Sbjct: 182 SQPADFDRTKGLNVMQNLLTAHPDVQAVFAQNDEMALGALRALQTAGKSDVMVVGFDGTP 241

Query: 293 AELEALAKGELDVTVMRMNDDTGVAMAEAIKWDLEGKSVPLVYSGDFEVVTKQ 345
              +A+  G+L  T+ ++ D  G    E     L+G+ V   Y  D ++V KQ
Sbjct: 242 DGEKAVNDGKLAATIAQLPDQIGAKGVETADKVLKGEKVQAKYPVDLKLVVKQ 294