Pairwise Alignments

Query, 364 a.a., autoinducer 2-binding periplasmic protein LuxP from Vibrio cholerae E7946 ATCC 55056

Subject, 309 a.a., ABC transporter, substrate binding protein (ribose) from Agrobacterium fabrum C58

 Score = 70.9 bits (172), Expect = 4e-17
 Identities = 42/124 (33%), Positives = 66/124 (53%), Gaps = 1/124 (0%)

Query: 230 LASSYYTKATEQSGYEATLNIVKNNPEIGFIYACATDVALGAAQALKELN-RQDILVNGW 288
           +A  +    ++  G++   N+++ NP++  ++A A  +ALGAAQA+K  N  Q I+V G+
Sbjct: 183 VAEQWSNMWSQDEGFQIMQNMLQANPDVSIVFAQADGLALGAAQAIKVANPSQKIVVGGF 242

Query: 289 GGGSAELEALAKGELDVTVMRMNDDTGVAMAEAIKWDLEGKSVPLVYSGDFEVVTKQDSA 348
            G +A LEAL  G  DVT  +     G    E     + G+ VP V   D  + TK++ A
Sbjct: 243 DGDTAALEALKNGVFDVTATQQTQKMGRMAVEMAVKIVGGEKVPAVQLSDATLTTKENVA 302

Query: 349 ARIA 352
             IA
Sbjct: 303 GFIA 306