Pairwise Alignments

Query, 857 a.a., autoinducer 2 sensor kinase/phosphatase LuxQ from Vibrio cholerae E7946 ATCC 55056

Subject, 890 a.a., hypothetical protein from Magnetospirillum magneticum AMB-1

 Score =  201 bits (510), Expect = 2e-55
 Identities = 136/380 (35%), Positives = 207/380 (54%), Gaps = 20/380 (5%)

Query: 466 SQAARREAEESARVRAEFLAKMSHELRTPLNGVLGVSQLLKRTPLNDEQREHVAVLCSSG 525
           ++ A++ AE + + +A FLA MSHE+RTP+NGV+G++ LL  T L+ EQR     +  S 
Sbjct: 242 ARQAQQVAERANQAKAAFLATMSHEIRTPMNGVIGMTGLLLDTQLDPEQRHFATTIRDSA 301

Query: 526 EHLLAVLNDILDFSRLEQGKFRIQKNEFRLKELVCAIDRIYRPLCNEKGLELVVNSNITT 585
           E LL V+NDILDFS+LE GK  ++  +F L  LV +I  I  P  + KG+E+    +   
Sbjct: 302 ESLLTVINDILDFSKLEAGKLDLESTDFELVGLVESIVDILAPRAHAKGIEIASMVDPDL 361

Query: 586 AAIVRSDQIRINQILFNLLNNAIKFTHQGSIRVELQ-LIEGDPLAQLVIQVVDTGIGIRE 644
            A VR D  R+ QIL NL  NAIKFT  G I +E++     D   +L   V DTGIGI +
Sbjct: 362 PAWVRGDPGRLRQILMNLAGNAIKFTSHGGISIEVRDETSPDGAGRLRFDVRDTGIGIPQ 421

Query: 645 QDLTVIFEPFMQAESTTTREYGGSGLGLTIVHSLVEMLSGQLHVSSEYGIGTRFEIQLPI 704
             +  +F  FMQ +++T R YGG+GLGL I   L EM+ G + V S  G G+ F   LP 
Sbjct: 422 DAIGRLFSMFMQVDASTARRYGGTGLGLAISKRLTEMMGGTIGVESTPGAGSLFWFSLPF 481

Query: 705 ELVEKPDAPQQLLPAPDPQPLFDKTLRVLLVEDNHTNAFIAQAFCRKYGLDVSWVTDGLQ 764
           ++VE   AP Q    PD         R+L+V+D+  N  + +   R +G+ V+   D   
Sbjct: 482 QMVE--TAPPQ---RPDL-----AGRRILVVDDSPINRDVLERQLRGFGVIVASCADAES 531

Query: 765 AIEEL-----KIHDYDLVLMDNQLPYLDGVETTRTIK-KVLHLPVVVYACTADGLEETRQ 818
           A+ EL         ++  ++D ++P + G +    I+ + +  P+ +   ++ GL     
Sbjct: 532 ALAELGRAAATGTPWEAAIIDARMPGVTGSDLIGRIRAEPVLAPMGLIIASSQGLSPEDG 591

Query: 819 AFFHAGAEYVLVKPLKEQTL 838
           +     A+  + KPL+ QT+
Sbjct: 592 S---PKADAFIHKPLRRQTI 608



 Score = 73.9 bits (180), Expect = 4e-17
 Identities = 44/144 (30%), Positives = 74/144 (51%), Gaps = 12/144 (8%)

Query: 706 LVEKPDAPQQLLPAPDPQPLFDKTLRVLLVEDNHTNAFIAQAFCRKYGLDVSWVTDGLQA 765
           L + P++  + +P P       + LR+L+ EDN  N  +A    RK G  V    DG +A
Sbjct: 624 LQDSPESEPEAIPRPA------RRLRILVAEDNPVNQQVAVGLLRKLGHSVDVAADGAEA 677

Query: 766 IEELKIHDYDLVLMDNQLPYLDGVETTRTIKKVL----HLPVVVYACTADGLEETRQAFF 821
           +E ++   YDLVLMD Q+P +DG++ T  I+ +      +P+V  A TA+ +    +   
Sbjct: 678 VEAVRSRPYDLVLMDVQMPEMDGLQATAAIRALTGGAERVPIV--AMTANAMRGDDRMCL 735

Query: 822 HAGAEYVLVKPLKEQTLHKALEHF 845
            AG +  + KP+  + L + L  +
Sbjct: 736 DAGMDRYISKPIDRRKLMEVLAQY 759