Pairwise Alignments

Query, 857 a.a., autoinducer 2 sensor kinase/phosphatase LuxQ from Vibrio cholerae E7946 ATCC 55056

Subject, 1258 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  231 bits (588), Expect = 3e-64
 Identities = 143/432 (33%), Positives = 232/432 (53%), Gaps = 23/432 (5%)

Query: 426 TEVDGRVYR---------WNLSPIMVEGQIISIITQGQDITTIAEAEKQSQAARREAEES 476
           TEVD  ++R         ++ +P++ +G ++  +   +DIT    A+     A   AE +
Sbjct: 550 TEVDEVLWRKDGTSFPVEYSTTPVLKDGTVVGTVVTFRDITERKRADALLHQALDRAEAA 609

Query: 477 ARVRAEFLAKMSHELRTPLNGVLGVSQLLKRTPLNDEQREHVAVLCSSGEHLLAVLNDIL 536
           ++ +A+FLA MSHE+RTP+N ++G+S L  +T LN  QR++V  +  SG+HLL ++NDIL
Sbjct: 610 SQAKADFLANMSHEIRTPMNAIIGMSHLALKTELNPRQRDYVRKIQQSGQHLLGIINDIL 669

Query: 537 DFSRLEQGKFRIQKNEFRLKELVCAIDRIYRPLCNEKGLELVVNSNITTAAIVRSDQIRI 596
           DFS++E GK  ++K    L  ++  +  +       KGLEL+ +        +  D +R+
Sbjct: 670 DFSKIEAGKLSVEKTAVHLDTVLDNVANLISEKTIAKGLELIFDVASDVPNDMVGDPLRL 729

Query: 597 NQILFNLLNNAIKFTHQGSIRVELQLIEG-DPLAQLVIQVVDTGIGIREQDLTVIFEPFM 655
            QIL N  NNA+KFT  G I V ++L E      +L  +V DTGIG+  + +  +F+ F 
Sbjct: 730 GQILINYANNAVKFTETGEIVVAVRLAEDLGEAVRLRFEVRDTGIGLSAEQMGRLFQSFQ 789

Query: 656 QAESTTTREYGGSGLGLTIVHSLVEMLSGQLHVSSEYGIGTRFEIQLPIELVEKPDAPQQ 715
           QA+++TTR+YGG+GLGL I   L E++ G++ V S+ G G+ F        + K    + 
Sbjct: 790 QADTSTTRKYGGTGLGLAISRKLAELMDGEVGVESQPGRGSTFWF---TACLGKGRPRRA 846

Query: 716 LLPAPDPQPLFDKTLRVLLVEDNHTNAFIAQAFCRKYGLDVSWVTDGLQAIEELK----I 771
           L+P PD      +   +L+V+DN     +           V  V  G  A+  ++     
Sbjct: 847 LVPKPDL-----RGRHMLVVDDNENARAVLVDMLTSMSFRVEAVESGAAAVARVREVAGA 901

Query: 772 HDYDLVLMDNQLPYLDGVETTRTIKKV-LHLPVVVYACTADGLEETRQAFFHAGAEYVLV 830
             +++V +D Q+P +DG+ET R I  + L  P  +   TA G EE  +A   AG E VL+
Sbjct: 902 KPFEVVFLDWQMPGMDGIETARAILGLGLTSPPHMIMVTAHGREEVMKAAESAGIEDVLI 961

Query: 831 KPLKEQTLHKAL 842
           KP+    +  A+
Sbjct: 962 KPVNPSIMFDAV 973



 Score = 66.6 bits (161), Expect = 9e-15
 Identities = 40/113 (35%), Positives = 58/113 (51%)

Query: 730  LRVLLVEDNHTNAFIAQAFCRKYGLDVSWVTDGLQAIEELKIHDYDLVLMDNQLPYLDGV 789
            LRVLL EDN  N  +A       G++V    +G  A++ +    YD+VLMD Q+P +DGV
Sbjct: 1005 LRVLLAEDNDFNQQVATELLADGGVEVEVAENGKIAVDMVMAAPYDMVLMDMQMPVMDGV 1064

Query: 790  ETTRTIKKVLHLPVVVYACTADGLEETRQAFFHAGAEYVLVKPLKEQTLHKAL 842
              TR I+++    + V A TA+ ++  R     AG    L KP+    L   L
Sbjct: 1065 AATREIRRLGFGDLPVIAMTANAMQADRDRCAAAGMNDYLTKPIDPDELFACL 1117